ECOD
F-group (family)

601.2.1.6 Cytochrom_B562

Open in classification tree →Pfam PF07361 →

Ligands and drugs

641
Member domains
403
with ligand contacts (≤ 4 Å)
62.9% of members
326
with DrugDomain annotations
50.9% of members
305
with a DrugBank compound
47.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 601.2.1.6 belongs to X-group 601 Four-helical up-and-down bundle, which binds 8.5 ligand superclasses per 20 proteins, broader than 67% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03317HECFerroheme C164
DB18267HEMFerroheme123
DB08440PXXN-1,10-phenanthrolin-5-ylacetamide28
DB00551HAEAcetohydroxamic acid25
DB04540CLRCholesterol3
DB00141NAGN-Acetylglucosamine1
DB00549ZLKZafirlukast1
DB01411KNTPranlukast1
DB02182HEBHybrid Between B and C Type Hemes (Protoporphyrin Ixcontaining Fe)1
DB02618NDSEthyl Dimethyl Ammonio Propane Sulfonate1
DB09459TLAL-tartaric acid1

Most frequently bound compounds

PDB ligandNameDomains in contact
ZNmetalZINC ION169
HECHEME C143
HEMPROTOPORPHYRIN IX CONTAINING FE139
CLCHLORIDE ION53
CAmetalCALCIUM ION50
NImetalNICKEL (II) ION41
CUmetalCOPPER (II) ION30
PXXN-1,10-phenanthrolin-5-ylacetamide28
COmetalCOBALT (II) ION27
HAEACETOHYDROXAMIC ACID25
MNmetalMANGANESE (II) ION22
FEmetalFE (III) ION21
NAmetalSODIUM ION15
MGmetalMAGNESIUM ION14
BS3metalBismuth(III) ION12
ME71,1'-ethane-1,2-diylbis(1H-pyrrole-2,5-dione)8
VmetalVANADIUM ION6
OLAOLEIC ACID5
OLC(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate5
CLRCHOLESTEROL4