ECOD
F-group (family)

7.1.1.1 PDZ

Open in classification tree →Pfam PF00595 →

Ligands and drugs

3,597
Member domains
710
with ligand contacts (≤ 4 Å)
19.7% of members
687
with DrugDomain annotations
19.1% of members
453
with a DrugBank compound
12.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 7.1.1.1 belongs to X-group 7 PDZ domain, which binds 8.1 ligand superclasses per 20 proteins, broader than 60% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00145GLYGlycine106
DB02517DGLD-Glutamic Acid105
DB00160ALAAlanine31
DB04447DTT1,4-Dithiothreitol7
DB00149LEULeucine6
DB00125ARGArginine4
DB00156THRThreonine4
DB02184DTVD-1,4-dithiothreitol4
DB03793BEZBenzoic acid4
DB07376ANS5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID)4
DB01972—Guanosine-5'-Monophosphate3
DB00142GLUGlutamic acid2
DB00143GSHGlutathione2
DB071144MB4-[(METHYLSULFONYL)AMINO]BENZOIC ACID2
DB00117HISHistidine1
DB00122CHTCholine1
DB00812P1ZPhenylbutazone1
DB03107BALbeta-Alanine1
DB08574STF(5R)-2-sulfanyl-5-[4-(trifluoromethyl)benzyl]-1,3-thiazol-4(5H)-one1
DB12010—Fostamatinib1

Most frequently bound compounds

PDB ligandNameDomains in contact
GLYGLYCINE108
DGLD-GLUTAMIC ACID105
CLCHLORIDE ION48
ALAALANINE31
IODIODIDE ION19
NAmetalSODIUM ION17
SCNTHIOCYANATE ION11
ZNmetalZINC ION7
LEULEUCINE6
LV41-[2-(trifluoromethyloxy)phenyl]thiourea6
12PDODECAETHYLENE GLYCOL5
LKV(2~{S})-2-[[(2~{S})-3-methyl-2-(3-oxidanylidene-1~{H}-isoindol-2-yl)butanoyl]amino]propanoic acid5
SZBsuccinimide5
ACEACETYL GROUP4
ANS5-(DIMETHYLAMINO)-1-NAPHTHALENESULFONIC ACID(DANSYL ACID)4
ARGARGININE4
BEZBENZOIC ACID4
CAmetalCALCIUM ION4
DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE4
DTV(2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL4