T-group (topology)
7502.1.1 Anticodon-binding domain of Class II aaRS
Ligands and drugs
3,783
Member domains
133
with ligand contacts (≤ 4 Å)
3.5% of members
79
with DrugDomain annotations
2.1% of members
42
with a DrugBank compound
1.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 7502.1.1 belongs to X-group 7502 Anticodon-binding domain of Class II aaRS, which has 10 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00117 | HIS | Histidine | 4 |
| DB03869 | SSA | 5'-O-(L-Serylsulfamoyl)adenosine | 4 |
| DB00156 | — | Threonine | 2 |
| DB03345 | BME | Mercaptoethanol | 2 |
| DB00142 | — | Glutamic acid | 1 |
| DB00145 | GLY | Glycine | 1 |
| DB00172 | — | Proline | 1 |
| DB02210 | HEZ | Hexane-1,6-Diol | 1 |
| DB02510 | — | 5'-O-(L-Prolylsulfamoyl)adenosine | 1 |
| DB02684 | — | 5'-O-(L-Cysteinylsulfamoyl)adenosine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 21 |
| MGmetal | MAGNESIUM ION | 16 |
| CAmetal | CALCIUM ION | 7 |
| HIS | HISTIDINE | 4 |
| SSA | 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE | 4 |
| ZNmetal | ZINC ION | 4 |
| A1IK1 | 1-[(4S)-8-chloranyl-3,4-dihydro-2H-chromen-4-yl]-3-(1-phenylpyrazol-3-yl)urea | 2 |
| 0P6 | 2-aminoquinolin-8-ol | 1 |
| BME | BETA-MERCAPTOETHANOL | 1 |
| BR | BROMIDE ION | 1 |
| F | FLUORIDE ION | 1 |
| GLY | GLYCINE | 1 |
| IOD | IODIDE ION | 1 |
| Kmetal | POTASSIUM ION | 1 |
| SRmetal | STRONTIUM ION | 1 |