T-group (topology)
7553.1.1 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
Ligands and drugs
314
Member domains
56
with ligand contacts (≤ 4 Å)
17.8% of members
56
with DrugDomain annotations
17.8% of members
55
with a DrugBank compound
17.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 7553.1.1 belongs to X-group 7553 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT), which has 5 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00627 | NIO | Niacin | 15 |
| DB02382 | NCN | Namn | 9 |
| DB01688 | PCR | P-Cresol | 7 |
| DB02591 | DMD | 5,6-Dimethylbenzimidazole | 6 |
| DB02030 | RBZ | Alpha-Ribazole-5'-Phosphate | 4 |
| DB03255 | IPH | Phenol | 4 |
| DB03887 | AAM | Alpha-Adenosine Monophosphate | 3 |
| DB00173 | ADE | Adenine | 2 |
| DB12944 | 13X | Phloroglucinol | 2 |
| DB01726 | 2AF | 2-Aminophenol | 1 |
| DB02163 | XYD | 2,5-Xylidine | 1 |
| DB02770 | 7RA | 7-alpha-D-Ribofuranosyl-2-aminopurine-5'-phosphate | 1 |
| DB02819 | RMB | Mono-[3,4-Dihydroxy-5-(5-Methyl-Benzoimidazol-1-Yl)-Tetrahydor-Furan-2-Ylmethyl] Ester | 1 |
| DB02905 | P2P | N7-(5'-Phospho-alpha-ribosyl)-2-hydroxypurine | 1 |
| DB02962 | BZI | Benzimidazole | 1 |
| DB03018 | 34A | 3,4-dimethylaniline | 1 |
| DB03079 | 1RB | Alpha-Ribazole-5'-Phosphate Derivative | 1 |
| DB03177 | 5MB | 5-methylbenzimidazole | 1 |
| DB03180 | 150 | 4,5-Dimethyl-1,2-phenylenediamine | 1 |
| DB03200 | 7RP | 7-Alpha-D-Ribofuranosyl-Purine-5'-Phosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NIO | NICOTINIC ACID | 15 |
| NCN | NICOTINATE MONONUCLEOTIDE | 9 |
| PCR | P-CRESOL | 7 |
| DMD | 5,6-DIMETHYLBENZIMIDAZOLE | 6 |
| IPH | PHENOL | 4 |
| RBZ | ALPHA-RIBAZOLE-5'-PHOSPHATE | 4 |
| AAM | ALPHA-ADENOSINE MONOPHOSPHATE | 3 |
| 13X | benzene-1,3,5-triol | 2 |
| ADE | ADENINE | 2 |
| CL | CHLORIDE ION | 2 |
| 150 | 4,5-DIMETHYL-1,2-PHENYLENEDIAMINE | 1 |
| 1RB | 1-ALPHA-D-RIBOFURANOSYL-BENZIMIAZOLE-5'-PHOSPHATE | 1 |
| 2AC | 2-AMINO-P-CRESOL | 1 |
| 2AF | 2-AMINOPHENOL | 1 |
| 2MP | 3,4-DIMETHYLPHENOL | 1 |
| 34A | 3,4-DIMETHYLANILINE | 1 |
| 5MB | 5-METHYLBENZIMIDAZOLE | 1 |
| 5OB | 5-METHOXYBENZIMIDAZOLE | 1 |
| 7RA | 7-ALPHA-D-RIBOFURANOSYL-2-AMINOPURINE-5'-PHOSPHATE | 1 |
| 7RP | 7-ALPHA-D-RIBOFURANOSYL-PURINE-5'-PHOSPHATE | 1 |