ECOD
F-group (family)

7569.1.1.1 UDG

Open in classification tree →Pfam PF03167 →

Ligands and drugs

790
Member domains
142
with ligand contacts (≤ 4 Å)
18.0% of members
135
with DrugDomain annotations
17.1% of members
96
with a DrugBank compound
12.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 7569.1.1.1 belongs to X-group 7569 Uracil-DNA glycosylase-like, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03419URAUracil27
DB03345BMEMercaptoethanol5
DB00544URFFluorouracil4
DB028312HPDihydrogenphosphate3
DB03800DUDeoxyuridine monophosphate2
DB03904UREUrea2
DB02134XANXanthine1
DB02256DUR2'-Deoxyuridine1
DB02262OROOrotic acid1
DB02406LEAN-Valeric Acid1
DB03792WBU5-Aminouracil1
DB069903024-[(1E,7E)-8-(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-3,6-DIOXA-2,7-DIAZAOCTA-1,7-DIEN-1-YL]BENZOIC ACID1
DB07760FCF3-[(1E,7E)-8-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-3,6-dioxa-2,7-diazaocta-1,7-dien-1-yl]benzoic acid1
DB08844URCUric acid1
DB11898OD32,4-thiazolidinedione1

Most frequently bound compounds

PDB ligandNameDomains in contact
SF4IRON/SULFUR CLUSTER42
URAURACIL27
CLCHLORIDE ION24
IODIODIDE ION5
NAmetalSODIUM ION5
URF5-FLUOROURACIL5
BMEBETA-MERCAPTOETHANOL4
BR8BARBITURIC ACID4
SCNTHIOCYANATE ION4
2HPDIHYDROGENPHOSPHATE ION3
MGmetalMAGNESIUM ION3
ODF5-oxidanyl-1~{H}-pyrimidine-2,4-dione3
3FL3-{[(4-{[(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)methyl]amino}butyl)amino]methyl}benzoic acid2
5CU2,4-dioxo-1,2,3,4-tetrahydropyrimidine-5-carboxylic acid2
5NU5-nitrouracil2
6UA6-aminopyrimidine-2,4(3H,5H)-dione2
DU2'-DEOXYURIDINE-5'-MONOPHOSPHATE2
HMU5-HYDROXYMETHYL URACIL2
UREUREA2
1RT4-amino-2-oxo-1,2-dihydropyrimidine-5-carboxylic acid1