F-group (family)
7574.1.1.2 E1_dh
Ligands and drugs
533
Member domains
205
with ligand contacts (≤ 4 Å)
38.5% of members
206
with DrugDomain annotations
38.6% of members
47
with a DrugBank compound
8.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 7574.1.1.2 belongs to X-group 7574 Thiamin diphosphate-binding fold (THDP-binding), which binds 8.6 ligand superclasses per 20 proteins, broader than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00131 | AMP | Adenosine phosphate | 4 |
| DB00157 | — | NADH | 3 |
| DB00119 | PYR | Pyruvic acid | 2 |
| DB02637 | OAA | Oxaloacetate Ion | 2 |
| DB03229 | COI | alpha-Ketoisocaproic acid | 2 |
| DB00313 | — | — | 1 |
| DB03993 | 4MV | Isocaproic acid | 1 |
| DB09092 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 164 |
| TPP | THIAMINE DIPHOSPHATE | 100 |
| MNmetal | MANGANESE (II) ION | 30 |
| Kmetal | POTASSIUM ION | 25 |
| CL | CHLORIDE ION | 17 |
| QSP | (4~{S})-4-[(2~{R})-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-2~{H}-1,3-thiazol-2-yl]-4-oxidanyl-4-phosphono-butanoic acid | 12 |
| TD7 | (4E)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-2(3H)-ylidene}-4-hydroxybutanoic acid | 8 |
| TPW | 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE | 8 |
| P6G | HEXAETHYLENE GLYCOL | 6 |
| ZP1 | (4~{S})-4-[(2~{R})-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-2~{H}-1,3-thiazol-2-yl]-4-[ethoxy(oxidanyl)phosphoryl]-4-oxidanyl-butanoic acid | 6 |
| TD6 | (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid | 5 |
| AMP | ADENOSINE MONOPHOSPHATE | 4 |
| DW3 | 2-oxidanylethanal | 4 |
| JQ5 | 4-[ethoxy(oxidanyl)phosphoryl]-4-oxidanylidene-butanoic acid | 4 |
| R1T | 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-5-[(1R)-1-HYDROXYETHYL]-3-METHYL-2-THIENYL}ETHYL TRIHYDROGEN DIPHOSPHATE | 4 |
| TD8 | (5R)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate | 4 |
| TD9 | (5S)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate | 4 |
| TDW | 2-[3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-[(1S)-1-oxidanylethyl]-1,3-thiazol-3-ium-5-yl]ethyl phosphono hydrogen phosphate | 4 |
| BEN | BENZAMIDINE | 3 |
| THV | C2-1-HYDROXY-3-METHYL-PROPYL-THIAMIN DIPHOSPHATE | 3 |