F-group (family)
7574.1.1.5 TPP_enzyme_C
Ligands and drugs
1,708
Member domains
806
with ligand contacts (≤ 4 Å)
47.2% of members
683
with DrugDomain annotations
40.0% of members
396
with a DrugBank compound
23.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 7574.1.1.5 belongs to X-group 7574 Thiamin diphosphate-binding fold (THDP-binding), which binds 8.6 ligand superclasses per 20 proteins, broader than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03147 | FAD | Flavin adenine dinucleotide | 171 |
| DB16833 | ADP | Adenosine disphosphate | 32 |
| DB00119 | PYR | Pyruvic acid | 25 |
| DB02280 | RMN | (R)-Mandelic acid | 16 |
| DB02410 | HTL | 2-Acetyl-3-[(4-Amino-2-Methyl-5-Pyrimidinyl)Methyl]-4-Methyl-5-(4,6,6-Trihydroxy-3,5-Dioxa-4,6-Diphosphahex-1-Yl)Thiazolium Inner Salt P,P'-Dioxide | 16 |
| DB01798 | P22 | Ethyl Dihydrogen Diphosphate | 9 |
| DB00161 | VAL | Valine | 8 |
| DB04447 | DTT | 1,4-Dithiothreitol | 8 |
| DB09157 | CO2 | Carbon dioxide | 8 |
| DB03361 | HE3 | 2-{(9as)-9a-[(1s)-1-Hydroxyethyl]-2,7-Dimethyl-9a,10-Dihydro-5h-Pyrimido[4,5-D][1,3]Thiazolo[3,2-a]Pyrimidin-8-Yl}Ethyl Trihydrogen Diphosphate | 6 |
| DB08689 | UQ1 | Ubiquinone Q1 | 6 |
| DB01992 | COA | Coenzyme A | 5 |
| DB14556 | F50 | Peracetic acid | 5 |
| DB02372 | PYD | 2,5-Dimethylpyrimidin-4-Amine | 4 |
| DB02676 | B3P | 2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-Diol | 4 |
| DB02707 | P25 | Pentyl Trihydrogen Diphosphate | 4 |
| DB01679 | P23 | Propyl Trihydrogen Diphosphate | 3 |
| DB03656 | 1TB | Tribenuron Methyl | 3 |
| DB09140 | OXY | Oxygen | 3 |
| DB09459 | TLA | L-tartaric acid | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 659 |
| TPP | THIAMINE DIPHOSPHATE | 444 |
| FAD | FLAVIN-ADENINE DINUCLEOTIDE | 206 |
| CAmetal | CALCIUM ION | 86 |
| MNmetal | MANGANESE (II) ION | 83 |
| TD6 | (4S)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3lambda~5~-thiazol-2-yl}-4-hydroxybutanoic acid | 71 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 64 |
| SF4 | IRON/SULFUR CLUSTER | 53 |
| Kmetal | POTASSIUM ION | 43 |
| NAmetal | SODIUM ION | 40 |
| TZD | 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGENDIPHOSPHATE | 40 |
| PYR | PYRUVIC ACID | 29 |
| UQ0 | 2,3-DIMETHOXY-5-METHYL-1,4-BENZOQUINONE | 24 |
| CL | CHLORIDE ION | 23 |
| TPW | 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE | 19 |
| TP9 | (3Z)-4-{[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]AMINO}-3-MERCAPTOPENT-3-EN-1-YL TRIHYDROGEN DIPHOSPHATE | 18 |
| TDL | 3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-2-(1-CARBOXY-1-HYDROXYETHYL)-5-(2-{[HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)-4-METHYL-1,3-THIAZOL-3-IUM | 17 |
| HTL | 2-ACETYL-THIAMINE DIPHOSPHATE | 16 |
| RMN | (R)-MANDELIC ACID | 16 |
| 60G | methyl 2-[(4,6-dimethoxypyrimidin-2-yl)carbamoylsulfamoylmethyl]benzoate | 15 |