F-group (family)
7574.1.1.8 Transket_pyr
Ligands and drugs
1,403
Member domains
398
with ligand contacts (≤ 4 Å)
28.4% of members
353
with DrugDomain annotations
25.2% of members
81
with a DrugBank compound
5.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 7574.1.1.8 belongs to X-group 7574 Thiamin diphosphate-binding fold (THDP-binding), which binds 8.6 ligand superclasses per 20 proteins, broader than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02410 | HTL | 2-Acetyl-3-[(4-Amino-2-Methyl-5-Pyrimidinyl)Methyl]-4-Methyl-5-(4,6,6-Trihydroxy-3,5-Dioxa-4,6-Diphosphahex-1-Yl)Thiazolium Inner Salt P,P'-Dioxide | 9 |
| DB03937 | E4P | D-erythrose 4-phosphate | 6 |
| DB00131 | AMP | Adenosine phosphate | 4 |
| DB00119 | PYR | Pyruvic acid | 3 |
| DB03229 | COI | alpha-Ketoisocaproic acid | 3 |
| DB00157 | — | NADH | 2 |
| DB01658 | N1T | 1'-Deazo-Thiamin Diphosphate | 2 |
| DB01682 | M6T | 6'-Methyl-Thiamin Diphosphate | 2 |
| DB02637 | OAA | Oxaloacetate Ion | 2 |
| DB02814 | N3T | 3'-Deazo-Thiamin Diphosphate | 2 |
| DB04034 | 5SP | Ribulose-5-Phosphate | 2 |
| DB04352 | RP5 | beta-D-Ribose-5-phosphate | 2 |
| DB00313 | — | — | 1 |
| DB02053 | R5P | Ribose-5-phosphate | 1 |
| DB02078 | PG5 | Triglyme | 1 |
| DB03993 | 4MV | Isocaproic acid | 1 |
| DB09092 | — | — | 1 |
| DB09130 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| TPP | THIAMINE DIPHOSPHATE | 186 |
| CAmetal | CALCIUM ION | 83 |
| Kmetal | POTASSIUM ION | 74 |
| ACO | ACETYL COENZYME *A | 32 |
| MGmetal | MAGNESIUM ION | 28 |
| NAmetal | SODIUM ION | 18 |
| CL | CHLORIDE ION | 13 |
| QSP | (4~{S})-4-[(2~{R})-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-2~{H}-1,3-thiazol-2-yl]-4-oxidanyl-4-phosphono-butanoic acid | 12 |
| HTL | 2-ACETYL-THIAMINE DIPHOSPHATE | 9 |
| TD7 | (4E)-4-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-5-(2-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-2(3H)-ylidene}-4-hydroxybutanoic acid | 8 |
| THD | 2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGENDIPHOSPHATE | 8 |
| TPW | 2-{4-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-METHYLTHIOPHEN-2-YL}ETHYL TRIHYDROGEN DIPHOSPHATE | 8 |
| 26G | 2-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]phenyl}ethanol | 6 |
| E4P | ERYTHOSE-4-PHOSPHATE | 6 |
| P6G | HEXAETHYLENE GLYCOL | 6 |
| ZP1 | (4~{S})-4-[(2~{R})-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-5-[2-[oxidanyl(phosphonooxy)phosphoryl]oxyethyl]-2~{H}-1,3-thiazol-2-yl]-4-[ethoxy(oxidanyl)phosphoryl]-4-oxidanyl-butanoic acid | 6 |
| AMP | ADENOSINE MONOPHOSPHATE | 4 |
| DW3 | 2-oxidanylethanal | 4 |
| JQ5 | 4-[ethoxy(oxidanyl)phosphoryl]-4-oxidanylidene-butanoic acid | 4 |
| NDQ | 2-[3-[(4-azanyl-2-methoxy-pyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate | 4 |