ECOD
T-group (topology)

7577.1.1 PLP-dependent transferases

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Ligands and drugs

11,669
Member domains
3,970
with ligand contacts (≤ 4 Å)
34.0% of members
3,656
with DrugDomain annotations
31.3% of members
3,033
with a DrugBank compound
26.0% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 7577.1.1 belongs to X-group 7577 PLP-dependent transferases, which binds 7.7 ligand superclasses per 20 proteins, broader than 51% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00114PLPPyridoxal phosphate1,690
DB02142PMPPyridoxamine-5'-Phosphate259
DB02824PLGN-Pyridoxyl-Glycine-5-Monophosphate148
DB00145GLYGlycine70
DB00133SERSerine48
DB04299MAEMaleic acid46
DB08845AKGOxogluric acid33
DB00151CYSCysteine32
DB00142GLUGlutamic acid27
DB02530ABUgamma-Aminobutyric acid26
DB04467PDAN-(5'-phosphopyridoxyl)-L-alanine26
DB11596FFOLevoleucovorin22
DB00160ALAAlanine21
DB03345BMEMercaptoethanol19
DB03553GUAGlutaric Acid18
DB00134METMethionine17
DB02783IK24'-Deoxy-4'-Acetylyamino-Pyridoxal-5'-Phosphate17
DB03287PPG4-(2-Amino-Ethoxy)-2-[(3-Hydroxy-2-Methyl-5-Phosphonooxymethyl-Pyridin-4-Ylmethyl)-Amino]-but-3-Enoic Acid17
DB00139SINSuccinic acid16
DB04422HCSHomocysteine16

Most frequently bound compounds

PDB ligandNameDomains in contact
PLPPYRIDOXAL-5'-PHOSPHATE1,780
CLCHLORIDE ION357
PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE262
NAmetalSODIUM ION183
PLGN-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]173
KmetalPOTASSIUM ION129
MGmetalMAGNESIUM ION87
CAmetalCALCIUM ION79
PLR(5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE77
GLYGLYCINE66
MAEMALEIC ACID45
SERSERINE45
4LM(2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid43
PLS[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE34
AKG2-OXOGLUTARIC ACID28
CYSCYSTEINE28
FESFE2/S2 (INORGANIC) CLUSTER28
0JO2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid26
ABUGAMMA-AMINO-BUTANOIC ACID25
FFON-[4-({[(6S)-2-amino-5-formyl-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid22