ECOD
T-group (topology)

7590.1.1 Middle domain in Argonaute homologs

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Ligands and drugs

748
Member domains
196
with ligand contacts (≤ 4 Å)
26.2% of members
129
with DrugDomain annotations
17.2% of members
67
with a DrugBank compound
9.0% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 7590.1.1 belongs to X-group 7590 Middle domain in Argonaute homologs, which has 12 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03255IPHPhenol11
DB00131AMPAdenosine phosphate4
DB03403C5PCytidine-5'-Monophosphate4
DB03685U5PUridine monophosphate4
DB00171ATPATP3
DB019725GPGuanosine-5'-Monophosphate3
DB033498BR8-Bromo-Adenosine-5'-Monophosphate3
DB03958GTG7-methyl-guanosine-5'-triphosphate-5'-guanosine3
DB00145GLYGlycine2
DB00150TRPTryptophan2
DB03345BMEMercaptoethanol1

Most frequently bound compounds

PDB ligandNameDomains in contact
MGmetalMAGNESIUM ION99
IPHPHENOL11
MNmetalMANGANESE (II) ION10
AMPADENOSINE MONOPHOSPHATE4
BMEBETA-MERCAPTOETHANOL4
C5PCYTIDINE-5'-MONOPHOSPHATE4
CAmetalCALCIUM ION4
CLCHLORIDE ION4
G6C5-oxidanyl-1H-pyridin-2-one4
U5PURIDINE-5'-MONOPHOSPHATE4
5GPGUANOSINE-5'-MONOPHOSPHATE3
8BR8-BROMO-ADENOSINE-5'-MONOPHOSPHATE3
A1ANT[(3~{S},4~{R},5~{R})-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate3
ATPADENOSINE-5'-TRIPHOSPHATE3
GTG7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE3
KmetalPOTASSIUM ION3
K2R3-[3-[9-[(2R,3R,4S,5R)-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]purin-6-yl]phenyl]propanoic acid3
UURIDINE-5'-MONOPHOSPHATE3
UTPURIDINE 5'-TRIPHOSPHATE3
D6O(~{Z})-4-formamido-4-oxidanylidene-but-2-enoic acid2