T-group (topology)
808.1.1 Arterivirus nucleocapsid protein
Ligands and drugs
157
Member domains
61
with ligand contacts (≤ 4 Å)
38.9% of members
63
with DrugDomain annotations
40.1% of members
52
with a DrugBank compound
33.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 808.1.1 belongs to X-group 808 Arterivirus nucleocapsid protein, which has 3 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04137 | GTP | Guanosine-5'-Triphosphate | 6 |
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 4 |
| DB02377 | GUN | Guanine | 3 |
| DB02857 | GMP | Guanosine | 2 |
| DB04447 | DTT | 1,4-Dithiothreitol | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 17 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 6 |
| Kmetal | POTASSIUM ION | 6 |
| NAmetal | SODIUM ION | 6 |
| 5GP | GUANOSINE-5'-MONOPHOSPHATE | 4 |
| GUN | GUANINE | 3 |
| TMO | trimethylamine oxide | 3 |
| DTT | 2,3-DIHYDROXY-1,4-DITHIOBUTANE | 2 |
| GMP | GUANOSINE | 2 |
| GKP | (2R,3R)-2,3-bis{[(2E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy}butanedioic acid | 1 |
| LFI | 1-[3,5-bis(3-bromanylpropanoyl)-1,3,5-triazinan-1-yl]-3-bromanyl-propan-1-one | 1 |
| MGmetal | MAGNESIUM ION | 1 |
| SCN | THIOCYANATE ION | 1 |