ECOD
T-group (topology)

862.1.1 Prim-pol domain

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Ligands and drugs

365
Member domains
90
with ligand contacts (≤ 4 Å)
24.7% of members
77
with DrugDomain annotations
21.1% of members
49
with a DrugBank compound
13.4% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 862.1.1 belongs to X-group 862 Prim-pol domain, which has 14 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03222DTPdATP14
DB04005UTPUridine 5'-triphosphate6
DB00171ATPATP4
DB02181DGT2'-Deoxyguanosine-5'-Triphosphate3
DB02596APCalpha,beta-Methyleneadenosine 5'-triphosphate2
DB03258DCP2'-Deoxycytidine 5'-triphosphate2
DB04137GTPGuanosine-5'-Triphosphate1
DB04160PPVPyrophosphoric acid1

Most frequently bound compounds

PDB ligandNameDomains in contact
ZNmetalZINC ION49
MNmetalMANGANESE (II) ION28
CAmetalCALCIUM ION14
DTP2'-DEOXYADENOSINE 5'-TRIPHOSPHATE14
ATPADENOSINE-5'-TRIPHOSPHATE6
UTPURIDINE 5'-TRIPHOSPHATE6
MGmetalMAGNESIUM ION4
DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE3
2KH5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine2
APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER2
CDmetalCADMIUM ION2
CLCHLORIDE ION2
DCP2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE2
HEJ9-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-9H-purin-6-amine2
HFD2-fluoro-9-{5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-9H-purin-6-amine2
JSQ2-fluoro-ATP2
DPODIPHOSPHATE1
GTPGUANOSINE-5'-TRIPHOSPHATE1
NAmetalSODIUM ION1
PPVPYROPHOSPHATE1