X-group (possible homology)

865 PheT/TilS domain

Ligands and drugs

711
Member domains
28
with ligand contacts (≤ 4 Å)
3.9% of members
11
with DrugDomain annotations
1.5% of members
8
with a DrugBank compound
1.1% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

4
Proteins with classified ligands
6
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Lipids and lipid-like molecules10.42.28×not tested
Organic acids and derivatives10.61.64×not tested
Organic oxygen compounds10.81.27×not tested
Homogeneous non-metal compounds10.91.18×not tested
Nucleosides, nucleotides, and analogues11.10.92×not tested
Homogeneous metal compounds11.90.52×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00135TYRTyrosine1
DB02159PGR(R)-Propylene glycol1
DB02210HEZHexane-1,6-Diol1
DB08437PUYPuromycin1

Most frequently bound compounds

PDB ligandNameDomains in contact
CLCHLORIDE ION1
DAH3,4-DIHYDROXYPHENYLALANINE1
HEZHEXANE-1,6-DIOL1
KmetalPOTASSIUM ION1
MGmetalMAGNESIUM ION1
MTYMETA-TYROSINE1
PGRR-1,2-PROPANEDIOL1
PUYPUROMYCIN1
TYRTYROSINE1