ECOD
F-group (family)

872.1.1.2 Dodecin

Open in classification tree →Pfam PF07311 →

Ligands and drugs

176
Member domains
137
with ligand contacts (≤ 4 Å)
77.8% of members
137
with DrugDomain annotations
77.8% of members
116
with a DrugBank compound
65.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 872.1.1.2 belongs to X-group 872 Dodecin subunit-like, which has 13 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03247FMNFlavin mononucleotide61
DB01992COACoenzyme A53
DB00140RBFRiboflavin19
DB03147FADFlavin adenine dinucleotide11
DB04345LUMLumichrome2
DB04726LFNLumiflavin1

Most frequently bound compounds

PDB ligandNameDomains in contact
CLCHLORIDE ION80
FMNFLAVIN MONONUCLEOTIDE61
COACOENZYME A53
NAmetalSODIUM ION27
RBFRIBOFLAVIN19
MGmetalMAGNESIUM ION16
CAmetalCALCIUM ION12
FADFLAVIN-ADENINE DINUCLEOTIDE11
420N-[2-({[5-(DIMETHYLAMINO)NAPHTHALEN-1-YL]SULFONYL}AMINO)ETHYL]-2-IODOACETAMIDE6
KmetalPOTASSIUM ION6
MNmetalMANGANESE (II) ION6
CSmetalCESIUM ION3
LUMLUMICHROME2
PTmetalPLATINUM (II) ION2
C3F3-[7,8-dimethyl-2,4-bis(oxidanylidene)benzo[g]pteridin-10-yl]propylcarbamic acid1
CF22'-deoxy-5'-O-{[2-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)ethyl]carbamoyl}guanosine1
CF4[4-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)butyl]carbamic acid1
LFNLUMIFLAVIN1