T-group (topology)
898.1.1 a+b domain in Ribosomal protein L1
Ligands and drugs
1,662
Member domains
36
with ligand contacts (≤ 4 Å)
2.2% of members
37
with DrugDomain annotations
2.2% of members
24
with a DrugBank compound
1.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 898.1.1 belongs to X-group 898 a+b domain in Ribosomal protein L1, which has 8 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00172 | PRO | Proline | 6 |
| DB00120 | PHE | Phenylalanine | 2 |
| DB00133 | SER | Serine | 1 |
| DB00145 | GLY | Glycine | 1 |
| DB01919 | PTL | Pentanal | 1 |
| DB09459 | TLA | L-tartaric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 15 |
| CL | CHLORIDE ION | 8 |
| Kmetal | POTASSIUM ION | 7 |
| NAmetal | SODIUM ION | 5 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 2 |
| GLY | GLYCINE | 1 |
| HGmetal | MERCURY (II) ION | 1 |
| N | ANY 5'-MONOPHOSPHATE NUCLEOTIDE | 1 |
| PTL | PENTANAL | 1 |
| TLA | L(+)-TARTARIC ACID | 1 |