ECOD classification of Salmonella enterica pangenome
Browse ECOD AF2 S. enterica classification as tree or download distributable files. This classification currently includes only proteins of S. enterica and associated strains, it is distinct from our other classifications of S. enterica.
Search by keyword
Search by UniProt accession:
Search by protein sequence using BLAST
ECOD is a hierarchical classification of protein domains according to their evolutionary relationships. This database contains our classification of structure predictions from S. enterica pathogenic strains from AlphaFold Database as well as our own models of proteins from previously unmodelled pathogenic strains.
Please cite the following reference:
H. Cheng, R. D. Schaeffer, Y. Liao, L. N. Kinch, J. Pei, S. Shi, B. H. Kim, N. V. Grishin. (2014) ECOD: An evolutionary classification of protein domains. PLoS Comput Biol 10(12): e1003926.
H. Cheng, Y. Liao, R. D. Schaeffer, N. V. Grishin. (2015) Manual classification strategies in the ECOD database. Proteins 83(7): 1238-1251.
| ECOD statistics | |
|---|---|
| 0 | Predicted structures |
| 0 | Domains |
| 0 | X-groups |
| 0 | H-groups |
Feel free to email us if you have any questions or suggestions.
Note: It seems that your browser does not have Javascript enabled.
We use JavaScript to organize the database in tree-view style. Our Javascript bits are completely safe and will NOT harm you computer. To make the online database fully functional, please enable JavaScript and reload the page.