ECODEvolutionary Classification of Protein Domains

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PDB 1CD3

X-RAY DIFFRACTION3.50 Å7 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1PROTEIN (SCAFFOLDING PROTEIN GPD)view chain

1 domain

e1cd311(1:7-144)

Chain 2PROTEIN (SCAFFOLDING PROTEIN GPD)view chain

1 domain

e1cd321(2:7-140)

Chain 3PROTEIN (SCAFFOLDING PROTEIN GPD)view chain

1 domain

e1cd331(3:7-144)

Chain 4PROTEIN (SCAFFOLDING PROTEIN GPD)view chain

1 domain

e1cd342(4:7-152)

Chain BPROTEIN (SCAFFOLDING PROTEIN GPB)view chain

1 domain

e1cd3B1(B:1-8,B:61-120)

Chain FPROTEIN (CAPSID PROTEIN GPF)view chain

1 domain

e1cd3F1(F:1-426)

Chain GPROTEIN (SPIKE PROTEIN GPG)view chain

1 domain

e1cd3G1(G:1-175)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	1	e1cd311	1:7-144	gpD	572 → 572.1 → 572.1.1
2	2	e1cd321	2:7-140	gpD	572 → 572.1 → 572.1.1
3	3	e1cd331	3:7-144	gpD	572 → 572.1 → 572.1.1
4	4	e1cd342	4:7-152	gpD	572 → 572.1 → 572.1.1
5	B	e1cd3B1	B:1-8,B:61-120	Phage_B	3657 → 3657.1 → 3657.1.1
6	F	e1cd3F1	F:1-426	Phage_F	10 → 10.2 → 10.2.1
7	G	e1cd3G1	G:1-175	Phage_G	10 → 10.2 → 10.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors