ECODEvolutionary Classification of Protein Domains

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PDB 1D3B

X-RAY DIFFRACTION2.00 Å12 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)view chain

1 domain

e1d3bA1(A:4-75)

Chain BPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)view chain

1 domain

e1d3bB1(B:7-87)

Chain CPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)view chain

1 domain

e1d3bC1(C:5-75)

Chain DPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)view chain

1 domain

e1d3bD1(D:7-87)

Chain EPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)view chain

1 domain

e1d3bE1(E:4-75)

Chain FPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)view chain

1 domain

e1d3bF1(F:7-87)

Chain GPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)view chain

1 domain

e1d3bG1(G:4-75)

Chain HPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)view chain

1 domain

e1d3bH1(H:7-87)

Chain IPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)view chain

1 domain

e1d3bI1(I:4-75)

Chain JPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)view chain

1 domain

e1d3bJ1(J:7-87)

Chain KPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3)view chain

1 domain

e1d3bK1(K:5-75)

Chain LPROTEIN (SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B)view chain

1 domain

e1d3bL1(L:7-87)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1d3bA1	A:4-75	LSM	4 → 4.1 → 4.1.1
2	B	e1d3bB1	B:7-87	LSM	4 → 4.1 → 4.1.1
3	C	e1d3bC1	C:5-75	LSM	4 → 4.1 → 4.1.1
4	D	e1d3bD1	D:7-87	LSM	4 → 4.1 → 4.1.1
5	E	e1d3bE1	E:4-75	LSM	4 → 4.1 → 4.1.1
6	F	e1d3bF1	F:7-87	LSM	4 → 4.1 → 4.1.1
7	G	e1d3bG1	G:4-75	LSM	4 → 4.1 → 4.1.1
8	H	e1d3bH1	H:7-87	LSM	4 → 4.1 → 4.1.1
9	I	e1d3bI1	I:4-75	LSM	4 → 4.1 → 4.1.1
10	J	e1d3bJ1	J:7-87	LSM	4 → 4.1 → 4.1.1
11	K	e1d3bK1	K:5-75	LSM	4 → 4.1 → 4.1.1
12	L	e1d3bL1	L:7-87	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors