ECODEvolutionary Classification of Protein Domains

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PDB 1D9K

X-RAY DIFFRACTION3.20 Å10 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AT-CELL RECEPTOR D10 (ALPHA CHAIN)view chain

1 domain

e1d9kA1(A:2-117)

Chain BT-CELL RECEPTOR D10 (BETA CHAIN)view chain

1 domain

e1d9kB1(B:3-116C)

Chain CMHC I-AK A CHAIN (ALPHA CHAIN)view chain

2 domains

e1d9kC1(C:82-180)e1d9kC2(C:1-81)

Chain DMHC I-AK B CHAIN (BETA CHAIN)view chain

2 domains

e1d9kD1(D:95-190)e1d9kD2(D:2-94)

Chain ET-CELL RECEPTOR D10 (ALPHA CHAIN)view chain

1 domain

e1d9kE1(E:2-117)

Chain FT-CELL RECEPTOR D10 (BETA CHAIN)view chain

1 domain

e1d9kF1(F:3-116C)

Chain GMHC I-AK A CHAIN (ALPHA CHAIN)view chain

2 domains

e1d9kG1(G:82-180)e1d9kG2(G:1-81)

Chain HMHC I-AK B CHAIN (BETA CHAIN)view chain

2 domains

e1d9kH1(H:95-190)e1d9kH2(H:2-94)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1d9kA1	A:2-117	V-set	11 → 11.1 → 11.1.1
2	B	e1d9kB1	B:3-116C	V-set	11 → 11.1 → 11.1.1
3	C	e1d9kC1	C:82-180	C1-set	11 → 11.1 → 11.1.1
4	C	e1d9kC2	C:1-81	MHC_II_alpha	233 → 233.1 → 233.1.1
5	D	e1d9kD1	D:95-190	C1-set	11 → 11.1 → 11.1.1
6	D	e1d9kD2	D:2-94	MHC_II_beta	233 → 233.1 → 233.1.1
7	E	e1d9kE1	E:2-117	V-set	11 → 11.1 → 11.1.1
8	F	e1d9kF1	F:3-116C	V-set	11 → 11.1 → 11.1.1
9	G	e1d9kG1	G:82-180	C1-set	11 → 11.1 → 11.1.1
10	G	e1d9kG2	G:1-81	MHC_II_alpha	233 → 233.1 → 233.1.1
11	H	e1d9kH1	H:95-190	C1-set	11 → 11.1 → 11.1.1
12	H	e1d9kH2	H:2-94	MHC_II_beta	233 → 233.1 → 233.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors