ECODEvolutionary Classification of Protein Domains

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PDB 1GK8

X-RAY DIFFRACTION1.40 Å8 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAINview chain

2 domains

e1gk8A1(A:11-149)e1gk8A2(A:151-475)

Chain CRIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAINview chain

2 domains

e1gk8C1(C:11-149)e1gk8C2(C:151-475)

Chain ERIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAINview chain

2 domains

e1gk8E1(E:11-149)e1gk8E2(E:151-475)

Chain GRIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE LARGE CHAINview chain

2 domains

e1gk8G1(G:11-149)e1gk8G2(G:151-475)

Chain IRIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1view chain

1 domain

e1gk8I1(I:1-126)

Chain KRIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1view chain

1 domain

e1gk8K1(K:1-126)

Chain MRIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1view chain

1 domain

e1gk8M1(M:1-126)

Chain ORIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1view chain

1 domain

e1gk8O1(O:1-126)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1gk8A1	A:11-149	RuBisCO_large_N	304 → 304.10 → 304.10.1
2	A	e1gk8A2	A:151-475	RuBisCO_large	2002 → 2002.1 → 2002.1.1
3	C	e1gk8C1	C:11-149	RuBisCO_large_N	304 → 304.10 → 304.10.1
4	C	e1gk8C2	C:151-475	RuBisCO_large	2002 → 2002.1 → 2002.1.1
5	E	e1gk8E1	E:11-149	RuBisCO_large_N	304 → 304.10 → 304.10.1
6	E	e1gk8E2	E:151-475	RuBisCO_large	2002 → 2002.1 → 2002.1.1
7	G	e1gk8G1	G:11-149	RuBisCO_large_N	304 → 304.10 → 304.10.1
8	G	e1gk8G2	G:151-475	RuBisCO_large	2002 → 2002.1 → 2002.1.1
9	I	e1gk8I1	I:1-126	RuBisCO_small	302 → 302.2 → 302.2.1
10	K	e1gk8K1	K:1-126	RuBisCO_small	302 → 302.2 → 302.2.1
11	M	e1gk8M1	M:1-126	RuBisCO_small	302 → 302.2 → 302.2.1
12	O	e1gk8O1	O:1-126	RuBisCO_small	302 → 302.2 → 302.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors