ECODEvolutionary Classification of Protein Domains

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PDB 1JFM

X-RAY DIFFRACTION2.85 Å5 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aretinoic acid early transcript betaview chain

1 domain

e1jfmA1(A:1-174)

Chain Bretinoic acid early transcript betaview chain

1 domain

e1jfmB1(B:1-174)

Chain Cretinoic acid early transcript betaview chain

1 domain

e1jfmC1(C:1-174)

Chain Dretinoic acid early transcript betaview chain

1 domain

e1jfmD1(D:1-174)

Chain Eretinoic acid early transcript betaview chain

1 domain

e1jfmE1(E:1-174)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1jfmA1	A:1-174	MHC_I_2	233 → 233.1 → 233.1.1
2	B	e1jfmB1	B:1-174	MHC_I_2	233 → 233.1 → 233.1.1
3	C	e1jfmC1	C:1-174	MHC_I_2	233 → 233.1 → 233.1.1
4	D	e1jfmD1	D:1-174	MHC_I_2	233 → 233.1 → 233.1.1
5	E	e1jfmE1	E:1-174	MHC_I_2	233 → 233.1 → 233.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors