ECODEvolutionary Classification of Protein Domains

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PDB 1KJ2

X-RAY DIFFRACTION2.71 Å10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AKB5-C20 T-Cell receptor alpha-chainview chain

1 domain

e1kj2A1(A:1-116)

Chain BKB5-C20 T-Cell receptor beta-chainview chain

1 domain

e1kj2B1(B:1-116)

Chain DKB5-C20 T-Cell receptor alpha-chainview chain

1 domain

e1kj2D1(D:1-116)

Chain EKB5-C20 T-Cell receptor beta-chainview chain

1 domain

e1kj2E1(E:1-116)

Chain HAllogeneic H-2Kb MHC Class I Moleculeview chain

2 domains

e1kj2H1(H:182-276)e1kj2H2(H:1-181)

Chain IAllogeneic H-2Kb MHC Class I Moleculeview chain

2 domains

e1kj2I1(I:182-276)e1kj2I2(I:1-181)

Chain LBeta-2 microglobulinview chain

1 domain

e1kj2L1(L:1-99)

Chain MBeta-2 microglobulinview chain

1 domain

e1kj2M1(M:1-99)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1kj2A1	A:1-116	V-set	11 → 11.1 → 11.1.1
2	B	e1kj2B1	B:1-116	V-set	11 → 11.1 → 11.1.1
3	D	e1kj2D1	D:1-116	V-set	11 → 11.1 → 11.1.1
4	E	e1kj2E1	E:1-116	V-set	11 → 11.1 → 11.1.1
5	H	e1kj2H1	H:182-276	C1-set	11 → 11.1 → 11.1.1
6	H	e1kj2H2	H:1-181	MHC_I	233 → 233.1 → 233.1.1
7	I	e1kj2I1	I:182-276	C1-set	11 → 11.1 → 11.1.1
8	I	e1kj2I2	I:1-181	MHC_I	233 → 233.1 → 233.1.1
9	L	e1kj2L1	L:1-99	C1-set	11 → 11.1 → 11.1.1
10	M	e1kj2M1	M:1-99	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors