ECODEvolutionary Classification of Protein Domains

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PDB 1LNU

X-RAY DIFFRACTION2.50 Å8 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AH-2 class II histocompatibility antigen, A-B alpha chainview chain

2 domains

e1lnuA1(A:84-181)e1lnuA2(A:1-82)

Chain BH-2 class II histocompatibility antigen, A beta chainview chain

2 domains

e1lnuB1(B:122-217)e1lnuB2(B:1-121)

Chain CH-2 class II histocompatibility antigen, A-B alpha chainview chain

2 domains

e1lnuC1(C:84-181)e1lnuC2(C:1-82)

Chain DH-2 class II histocompatibility antigen, A beta chainview chain

2 domains

e1lnuD1(D:122-217)e1lnuD2(D:1-121)

Chain EH-2 class II histocompatibility antigen, A-B alpha chainview chain

2 domains

e1lnuE1(E:84-181)e1lnuE2(E:1-82)

Chain FH-2 class II histocompatibility antigen, A beta chainview chain

2 domains

e1lnuF1(F:122-217)e1lnuF2(F:1-121)

Chain GH-2 class II histocompatibility antigen, A-B alpha chainview chain

2 domains

e1lnuG1(G:84-181)e1lnuG2(G:1-82)

Chain HH-2 class II histocompatibility antigen, A beta chainview chain

2 domains

e1lnuH1(H:122-217)e1lnuH2(H:1-121)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1lnuA1	A:84-181	C1-set	11 → 11.1 → 11.1.1
2	A	e1lnuA2	A:1-82	MHC_II_alpha	233 → 233.1 → 233.1.1
3	B	e1lnuB1	B:122-217	C1-set	11 → 11.1 → 11.1.1
4	B	e1lnuB2	B:1-121	MHC_II_beta	233 → 233.1 → 233.1.1
5	C	e1lnuC1	C:84-181	C1-set	11 → 11.1 → 11.1.1
6	C	e1lnuC2	C:1-82	MHC_II_alpha	233 → 233.1 → 233.1.1
7	D	e1lnuD1	D:122-217	C1-set	11 → 11.1 → 11.1.1
8	D	e1lnuD2	D:1-121	MHC_II_beta	233 → 233.1 → 233.1.1
9	E	e1lnuE1	E:84-181	C1-set	11 → 11.1 → 11.1.1
10	E	e1lnuE2	E:1-82	MHC_II_alpha	233 → 233.1 → 233.1.1
11	F	e1lnuF1	F:122-217	C1-set	11 → 11.1 → 11.1.1
12	F	e1lnuF2	F:1-121	MHC_II_beta	233 → 233.1 → 233.1.1
13	G	e1lnuG1	G:84-181	C1-set	11 → 11.1 → 11.1.1
14	G	e1lnuG2	G:1-82	MHC_II_alpha	233 → 233.1 → 233.1.1
15	H	e1lnuH1	H:122-217	C1-set	11 → 11.1 → 11.1.1
16	H	e1lnuH2	H:1-121	MHC_II_beta	233 → 233.1 → 233.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors