ECODEvolutionary Classification of Protein Domains

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PDB 1NJ9

X-RAY DIFFRACTION2.35 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aimmunoglobulin variable chainview chain

2 domains

e1nj9A1(A:1-108)e1nj9A2(A:109-210)

Chain Bimmunoglobulin heavy chainview chain

2 domains

e1nj9B1(B:1-113)e1nj9B2(B:114-212)

Chain Himmunoglobulin heavy chainview chain

2 domains

e1nj9H1(H:1-113)e1nj9H2(H:114-212)

Chain Limmunoglobulin variable chainview chain

2 domains

e1nj9L1(L:1-108)e1nj9L2(L:109-210)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1nj9A1	A:1-108	V-set	11 → 11.1 → 11.1.1
2	A	e1nj9A2	A:109-210	C1-set	11 → 11.1 → 11.1.1
3	B	e1nj9B1	B:1-113	V-set	11 → 11.1 → 11.1.1
4	B	e1nj9B2	B:114-212	C1-set	11 → 11.1 → 11.1.1
5	H	e1nj9H1	H:1-113	V-set	11 → 11.1 → 11.1.1
6	H	e1nj9H2	H:114-212	C1-set	11 → 11.1 → 11.1.1
7	L	e1nj9L1	L:1-108	V-set	11 → 11.1 → 11.1.1
8	L	e1nj9L2	L:109-210	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors