ECODEvolutionary Classification of Protein Domains

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PDB 1QGC

ELECTRON MICROSCOPY6 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1PROTEIN (VIRUS CAPSID PROTEIN VP1)view chain

1 domain

e1qgc11(1:1-187)

Chain 2PROTEIN (VIRUS CAPSID PROTEIN VP2)view chain

1 domain

e1qgc21(2:1-218)

Chain 3PROTEIN (VIRUS CAPSID PROTEIN VP3)view chain

1 domain

e1qgc31(3:1-220)

Chain 4PROTEIN (IMMUNOGLOBULIN LIGHT CHAIN)view chain

2 domains

e1qgc41(4:112-218)e1qgc42(4:1-111)

Chain APROTEIN (IMMUNOGLOBULIN HEAVY CHAIN)view chain

2 domains

e1qgcA01(A:1-120)e1qgcA02(A:121-220)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	1	e1qgc11	1:1-187	Rhv	10 → 10.2 → 10.2.1
2	2	e1qgc21	2:1-218	Rhv	10 → 10.2 → 10.2.1
3	3	e1qgc31	3:1-220	Rhv	10 → 10.2 → 10.2.1
4	4	e1qgc41	4:112-218	C1-set	11 → 11.1 → 11.1.1
5	4	e1qgc42	4:1-111	V-set	11 → 11.1 → 11.1.1
6	A	e1qgcA01	A:1-120	V-set	11 → 11.1 → 11.1.1
7	A	e1qgcA02	A:121-220	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors