ECODEvolutionary Classification of Protein Domains

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PDB 1YDE

X-RAY DIFFRACTION2.40 Å16 chains16 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeA1(A:4-253)

Chain BRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeB1(B:4-253)

Chain CRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeC1(C:4-253)

Chain DRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeD1(D:4-253)

Chain ERetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeE1(E:4-253)

Chain FRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeF1(F:4-253)

Chain GRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeG1(G:6-252)

Chain HRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeH1(H:5-253)

Chain IRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeI1(I:7-253)

Chain JRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeJ1(J:4-253)

Chain KRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeK1(K:4-253)

Chain LRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeL1(L:4-253)

Chain MRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeM1(M:10-253)

Chain NRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeN1(N:10-253)

Chain ORetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeO1(O:7-253)

Chain PRetinal dehydrogenase/reductase 3view chain

1 domain

e1ydeP1(P:6-253)

All Domains (16)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1ydeA1	A:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
2	B	e1ydeB1	B:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
3	C	e1ydeC1	C:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
4	D	e1ydeD1	D:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
5	E	e1ydeE1	E:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
6	F	e1ydeF1	F:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
7	G	e1ydeG1	G:6-252	adh_short_C2	2003 → 2003.1 → 2003.1.1
8	H	e1ydeH1	H:5-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
9	I	e1ydeI1	I:7-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
10	J	e1ydeJ1	J:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
11	K	e1ydeK1	K:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
12	L	e1ydeL1	L:4-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
13	M	e1ydeM1	M:10-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
14	N	e1ydeN1	N:10-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
15	O	e1ydeO1	O:7-253	adh_short_C2	2003 → 2003.1 → 2003.1.1
16	P	e1ydeP1	P:6-253	adh_short_C2	2003 → 2003.1 → 2003.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors