ECODEvolutionary Classification of Protein Domains

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PDB 2A6D

X-RAY DIFFRACTION2.90 Å5 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AGermline antibody 36-65 Fab light chainview chain

2 domains

e2a6dA1(A:1-108)e2a6dA2(A:109-214)

Chain BGermline antibody 36-65 Fab Heavy chainview chain

2 domains

e2a6dB1(B:122-219)e2a6dB2(B:1-121)

Chain HGermline antibody 36-65 Fab Heavy chainview chain

2 domains

e2a6dH1(H:122-219)e2a6dH2(H:1-121)

Chain LGermline antibody 36-65 Fab light chainview chain

2 domains

e2a6dL1(L:1-108)e2a6dL2(L:109-214)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2a6dA1	A:1-108	V-set	11 → 11.1 → 11.1.1
2	A	e2a6dA2	A:109-214	C1-set	11 → 11.1 → 11.1.1
3	B	e2a6dB1	B:122-219	C1-set	11 → 11.1 → 11.1.1
4	B	e2a6dB2	B:1-121	V-set	11 → 11.1 → 11.1.1
5	H	e2a6dH1	H:122-219	C1-set	11 → 11.1 → 11.1.1
6	H	e2a6dH2	H:1-121	V-set	11 → 11.1 → 11.1.1
7	L	e2a6dL1	L:1-108	V-set	11 → 11.1 → 11.1.1
8	L	e2a6dL2	L:109-214	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors