ECODEvolutionary Classification of Protein Domains

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PDB 2C35

X-RAY DIFFRACTION2.70 Å8 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ADNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDEview chain

1 domain

e2c35A1(A:14-142)

Chain BDNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDEview chain

2 domains

e2c35B1(B:79-171)e2c35B2(B:1-77)

Chain CDNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDEview chain

1 domain

e2c35C1(C:14-142)

Chain DDNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDEview chain

2 domains

e2c35D1(D:79-171)e2c35D2(D:1-77)

Chain EDNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDEview chain

1 domain

e2c35E1(E:14-139)

Chain FDNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDEview chain

2 domains

e2c35F1(F:79-171)e2c35F2(F:1-77)

Chain GDNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDEview chain

1 domain

e2c35G1(G:14-139)

Chain HDNA-DIRECTED RNA POLYMERASE II 19 KDA POLYPEPTIDEview chain

2 domains

e2c35H1(H:79-171)e2c35H2(H:1-77)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2c35A1	A:14-142	RNA_pol_Rpb4	102 → 102.1 → 102.1.1
2	B	e2c35B1	B:79-171	S1	2 → 2.1 → 2.1.1
3	B	e2c35B2	B:1-77	SHS2_Rpb7-N	872 → 872.1 → 872.1.1
4	C	e2c35C1	C:14-142	RNA_pol_Rpb4	102 → 102.1 → 102.1.1
5	D	e2c35D1	D:79-171	S1	2 → 2.1 → 2.1.1
6	D	e2c35D2	D:1-77	SHS2_Rpb7-N	872 → 872.1 → 872.1.1
7	E	e2c35E1	E:14-139	RNA_pol_Rpb4	102 → 102.1 → 102.1.1
8	F	e2c35F1	F:79-171	S1	2 → 2.1 → 2.1.1
9	F	e2c35F2	F:1-77	SHS2_Rpb7-N	872 → 872.1 → 872.1.1
10	G	e2c35G1	G:14-139	RNA_pol_Rpb4	102 → 102.1 → 102.1.1
11	H	e2c35H1	H:79-171	S1	2 → 2.1 → 2.1.1
12	H	e2c35H2	H:1-77	SHS2_Rpb7-N	872 → 872.1 → 872.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors