ECODEvolutionary Classification of Protein Domains

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PDB 2GHW

X-RAY DIFFRACTION2.30 Å4 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASpike glycoproteinview chain

1 domain

e2ghwA1(A:320-502)

Chain Banti-sars scFv antibody, 80Rview chain

2 domains

e2ghwB1(B:133-239)e2ghwB2(B:1-117)

Chain CSpike glycoproteinview chain

1 domain

e2ghwC1(C:320-502)

Chain Danti-sars scFv antibody, 80Rview chain

2 domains

e2ghwD1(D:133-239)e2ghwD2(D:1-117)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2ghwA1	A:320-502	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
2	B	e2ghwB1	B:133-239	V-set	11 → 11.1 → 11.1.1
3	B	e2ghwB2	B:1-117	V-set	11 → 11.1 → 11.1.1
4	C	e2ghwC1	C:320-502	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
5	D	e2ghwD1	D:133-239	V-set	11 → 11.1 → 11.1.1
6	D	e2ghwD2	D:1-117	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors