ECODEvolutionary Classification of Protein Domains

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PDB 2GK0

X-RAY DIFFRACTION2.45 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ACatalytic elimination antibody 13G5 light chainview chain

2 domains

e2gk0A1(A:1-107)e2gk0A2(A:108-212)

Chain BCatalytic elimination antibody 13G5 heavy chainview chain

2 domains

e2gk0B1(B:1-113)e2gk0B2(B:114-228)

Chain HCatalytic elimination antibody 13G5 heavy chainview chain

2 domains

e2gk0H1(H:1-113)e2gk0H2(H:114-228)

Chain LCatalytic elimination antibody 13G5 light chainview chain

2 domains

e2gk0L1(L:1-107)e2gk0L2(L:108-212)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2gk0A1	A:1-107	V-set	11 → 11.1 → 11.1.1
2	A	e2gk0A2	A:108-212	C1-set	11 → 11.1 → 11.1.1
3	B	e2gk0B1	B:1-113	V-set	11 → 11.1 → 11.1.1
4	B	e2gk0B2	B:114-228	C1-set	11 → 11.1 → 11.1.1
5	H	e2gk0H1	H:1-113	V-set	11 → 11.1 → 11.1.1
6	H	e2gk0H2	H:114-228	C1-set	11 → 11.1 → 11.1.1
7	L	e2gk0L1	L:1-107	V-set	11 → 11.1 → 11.1.1
8	L	e2gk0L2	L:108-212	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors