ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 2WWB

ELECTRON MICROSCOPY15 chains11 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain APROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT ALPHA ISOFORM 1view chain

1 domain

e2wwbA1(A:1-476)

Chain BPROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMAview chain

1 domain

e2wwbB1(B:1-68)

Chain CPROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETAview chain

1 domain

e2wwbC1(C:61-96)

Chain H60S RIBOSOMAL PROTEIN L4-Bview chain

1 domain

e2wwbH1(H:1-269)

Chain I60S RIBOSOMAL PROTEIN L17-Aview chain

1 domain

e2wwbI1(I:1-153)

Chain J60S RIBOSOMAL PROTEIN L19view chain

1 domain

e2wwbJ1(J:1-53)

Chain K60S RIBOSOMAL PROTEIN L25view chain

1 domain

e2wwbK1(K:57-139)

Chain L60S RIBOSOMAL PROTEIN L26-Aview chain

1 domain

e2wwbL1(L:1-127)

Chain M60S RIBOSOMAL PROTEIN L31-Aview chain

1 domain

e2wwbM1(M:9-92)

Chain N60S RIBOSOMAL PROTEIN L35view chain

1 domain

e2wwbN1(N:1-69)

Chain O60S RIBOSOMAL PROTEIN L39view chain

1 domain

e2wwbO1(O:1-37)

All Domains (11)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2wwbA1	A:1-476	SecY,Plug_translocon	5061 → 5061.1 → 5061.1.1
2	B	e2wwbB1	B:1-68	SecE	5027 → 5027.1 → 5027.1.1
3	C	e2wwbC1	C:61-96	Sec61_beta	5028 → 5028.1 → 5028.1.1
4	H	e2wwbH1	H:1-269	Ribosomal_L4	7559 → 7559.1 → 7559.1.1
5	I	e2wwbI1	I:1-153	Ribosomal_L22	218 → 218.2 → 218.2.1
6	J	e2wwbJ1	J:1-53	Ribosomal_L19e	637 → 637.1 → 637.1.1
7	K	e2wwbK1	K:57-139	Ribosomal_L23	304 → 304.109 → 304.109.1
8	L	e2wwbL1	L:1-127	KOW, Ribosomal_L26	4 → 4.1 → 4.1.1
9	M	e2wwbM1	M:9-92	Ribosomal_L31e	259 → 259.1 → 259.1.1
10	N	e2wwbN1	N:1-69	Ribosomal_L29	192 → 192.4 → 192.4.1
11	O	e2wwbO1	O:1-37	Ribosomal_L39	585 → 585.1 → 585.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors