ECODEvolutionary Classification of Protein Domains

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PDB 2YMD

X-RAY DIFFRACTION1.96 Å10 chains10 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdA1(A:1-212)

Chain BSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdB1(B:1-200)

Chain CSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdC1(C:1-200)

Chain DSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdD1(D:1-200)

Chain ESOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdE1(E:1-200)

Chain FSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdF1(F:1-200)

Chain GSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdG1(G:1-200)

Chain HSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdH1(H:1-200)

Chain ISOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdI1(I:1-200)

Chain JSOLUBLE ACETYLCHOLINE RECEPTORview chain

1 domain

e2ymdJ1(J:1-200)

All Domains (10)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2ymdA1	A:1-212	Neur_chan_LBD	11 → 11.12 → 11.12.1
2	B	e2ymdB1	B:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
3	C	e2ymdC1	C:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
4	D	e2ymdD1	D:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
5	E	e2ymdE1	E:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
6	F	e2ymdF1	F:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
7	G	e2ymdG1	G:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
8	H	e2ymdH1	H:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
9	I	e2ymdI1	I:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1
10	J	e2ymdJ1	J:1-200	Neur_chan_LBD	11 → 11.12 → 11.12.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors