ECODEvolutionary Classification of Protein Domains

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PDB 2YMS

X-RAY DIFFRACTION2.10 Å4 chains5 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AOUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMBview chain

1 domain

e2ymsA01(A:62-191)

Chain A-C-B-Dview chain

1 domain

e2yms.1(A:1-130,C:1-75,B:1-74,D:1-74)

Chain BOUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMBview chain

1 domain

e2ymsB01(B:113-186)

Chain COUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMBview chain

1 domain

e2ymsC01(C:229-322)

Chain DOUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMBview chain

1 domain

e2ymsD01(D:247-320)

All Domains (5)

#	Chain	Domain ID	Range	Family	Classification
1	A	e2ymsA01	A:62-191	PQQ_2	5 → 5.1 → 5.1.4
2	A-C-B-D	e2yms.1	A:1-130,C:1-75,B:1-74,D:1-74	PQQ_2	5 → 5.1 → 5.1.11
3	B	e2ymsB01	B:113-186	PQQ_2	5 → 5.1 → 5.1.4
4	C	e2ymsC01	C:229-322	PQQ_2	5 → 5.1 → 5.1.4
5	D	e2ymsD01	D:247-320	PQQ_2	5 → 5.1 → 5.1.4

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors