ECODEvolutionary Classification of Protein Domains

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PDB 3B9K

X-RAY DIFFRACTION2.70 Å8 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AT-cell surface glycoprotein CD8 alpha chainview chain

1 domain

e3b9kA1(A:4-121)

Chain BT-cell surface glycoprotein CD8 beta chainview chain

1 domain

e3b9kB1(B:1-117)

Chain CFab Light Chainview chain

2 domains

e3b9kC1(C:1-107)e3b9kC2(C:108-214)

Chain DFab Heavy chainview chain

2 domains

e3b9kD1(D:1-113)e3b9kD2(D:114-230)

Chain ET-cell surface glycoprotein CD8 alpha chainview chain

1 domain

e3b9kE1(E:4-121)

Chain FT-cell surface glycoprotein CD8 beta chainview chain

1 domain

e3b9kF1(F:1-117)

Chain HFab Heavy chainview chain

2 domains

e3b9kH1(H:1-113)e3b9kH2(H:114-230)

Chain LFab Light Chainview chain

2 domains

e3b9kL1(L:1-107)e3b9kL2(L:108-214)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3b9kA1	A:4-121	V-set	11 → 11.1 → 11.1.1
2	B	e3b9kB1	B:1-117	V-set	11 → 11.1 → 11.1.1
3	C	e3b9kC1	C:1-107	V-set	11 → 11.1 → 11.1.1
4	C	e3b9kC2	C:108-214	C1-set	11 → 11.1 → 11.1.1
5	D	e3b9kD1	D:1-113	V-set	11 → 11.1 → 11.1.1
6	D	e3b9kD2	D:114-230	C1-set	11 → 11.1 → 11.1.1
7	E	e3b9kE1	E:4-121	V-set	11 → 11.1 → 11.1.1
8	F	e3b9kF1	F:1-117	V-set	11 → 11.1 → 11.1.1
9	H	e3b9kH1	H:1-113	V-set	11 → 11.1 → 11.1.1
10	H	e3b9kH2	H:114-230	C1-set	11 → 11.1 → 11.1.1
11	L	e3b9kL1	L:1-107	V-set	11 → 11.1 → 11.1.1
12	L	e3b9kL2	L:108-214	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors