ECODEvolutionary Classification of Protein Domains

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PDB 3BSZ

X-RAY DIFFRACTION3.38 Å10 chains14 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ATransthyretinview chain

1 domain

e3bszA1(A:7-125)

Chain BTransthyretinview chain

1 domain

e3bszB1(B:7-125)

Chain CTransthyretinview chain

1 domain

e3bszC1(C:7-125)

Chain DTransthyretinview chain

1 domain

e3bszD1(D:7-125)

Chain EPlasma retinol-binding proteinview chain

1 domain

e3bszE1(E:1-174)

Chain FPlasma retinol-binding proteinview chain

1 domain

e3bszF1(F:1-174)

Chain HFab fragment light chainview chain

2 domains

e3bszH1(H:1-118)e3bszH2(H:119-215)

Chain LFab fragment heavy chainview chain

2 domains

e3bszL1(L:1-111)e3bszL2(L:112-215)

Chain MFab fragment heavy chainview chain

2 domains

e3bszM1(M:1-111)e3bszM2(M:112-215)

Chain NFab fragment light chainview chain

2 domains

e3bszN1(N:1-118)e3bszN2(N:119-215)

All Domains (14)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3bszA1	A:7-125	Transthyretin	11 → 11.1 → 11.1.4
2	B	e3bszB1	B:7-125	Transthyretin	11 → 11.1 → 11.1.4
3	C	e3bszC1	C:7-125	Transthyretin	11 → 11.1 → 11.1.4
4	D	e3bszD1	D:7-125	Transthyretin	11 → 11.1 → 11.1.4
5	E	e3bszE1	E:1-174	Lipocalin	9 → 9.1 → 9.1.1
6	F	e3bszF1	F:1-174	Lipocalin	9 → 9.1 → 9.1.1
7	H	e3bszH1	H:1-118	V-set	11 → 11.1 → 11.1.1
8	H	e3bszH2	H:119-215	C1-set	11 → 11.1 → 11.1.1
9	L	e3bszL1	L:1-111	V-set	11 → 11.1 → 11.1.1
10	L	e3bszL2	L:112-215	C1-set	11 → 11.1 → 11.1.1
11	M	e3bszM1	M:1-111	V-set	11 → 11.1 → 11.1.1
12	M	e3bszM2	M:112-215	C1-set	11 → 11.1 → 11.1.1
13	N	e3bszN1	N:1-118	V-set	11 → 11.1 → 11.1.1
14	N	e3bszN2	N:119-215	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors