ECODEvolutionary Classification of Protein Domains

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PDB 3CFD

X-RAY DIFFRACTION2.50 Å4 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain APURPLE-FLUORESCENT ANTIBODY EP2-25C10-KAPPA LIGHT CHAINview chain

2 domains

e3cfdA1(A:1-108)e3cfdA2(A:109-213)

Chain BPURPLE-FLUORESCENT ANTIBODY EP2-25C10-IGG2B HEAVY CHAINview chain

2 domains

e3cfdB1(B:1-113)e3cfdB2(B:114-227)

Chain HPURPLE-FLUORESCENT ANTIBODY EP2-25C10-IGG2B HEAVY CHAINview chain

2 domains

e3cfdH1(H:1-113)e3cfdH2(H:114-228)

Chain LPURPLE-FLUORESCENT ANTIBODY EP2-25C10-KAPPA LIGHT CHAINview chain

2 domains

e3cfdL1(L:1-108)e3cfdL2(L:109-213)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3cfdA1	A:1-108	V-set	11 → 11.1 → 11.1.1
2	A	e3cfdA2	A:109-213	C1-set	11 → 11.1 → 11.1.1
3	B	e3cfdB1	B:1-113	V-set	11 → 11.1 → 11.1.1
4	B	e3cfdB2	B:114-227	C1-set	11 → 11.1 → 11.1.1
5	H	e3cfdH1	H:1-113	V-set	11 → 11.1 → 11.1.1
6	H	e3cfdH2	H:114-228	C1-set	11 → 11.1 → 11.1.1
7	L	e3cfdL1	L:1-108	V-set	11 → 11.1 → 11.1.1
8	L	e3cfdL2	L:109-213	C1-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors