ECODEvolutionary Classification of Protein Domains

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PDB 3CW1

X-RAY DIFFRACTION5.49 Å40 chains36 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0U1 small nuclear ribonucleoprotein Cview chain

1 domain

e3cw101(0:404-457)

Chain 1Small nuclear ribonucleoprotein Fview chain

1 domain

e3cw111(1:407-481)

Chain 2Small nuclear ribonucleoprotein Fview chain

1 domain

e3cw121(2:606-681)

Chain 3Small nuclear ribonucleoprotein Gview chain

1 domain

e3cw131(3:204-276)

Chain 4Small nuclear ribonucleoprotein Gview chain

1 domain

e3cw141(4:404-476)

Chain 5Small nuclear ribonucleoprotein Gview chain

1 domain

e3cw151(5:604-676)

Chain 6U1 small nuclear ribonucleoprotein 70 kDaview chain

1 domain

e3cw161(6:303-380)

Chain 7U1 small nuclear ribonucleoprotein 70 kDaview chain

1 domain

e3cw171(7:503-580)

Chain 8U1 small nuclear ribonucleoprotein 70 kDaview chain

1 domain

e3cw181(8:703-780)

Chain 9U1 small nuclear ribonucleoprotein Cview chain

1 domain

e3cw191(9:204-261)

Chain ASmall nuclear ribonucleoprotein-associated proteins B and B'view chain

1 domain

e3cw1A1(A:7-87)

Chain BSmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e3cw1B1(B:2-78)

Chain CSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e3cw1C1(C:11-114)

Chain DSmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e3cw1D1(D:6-81)

Chain ESmall nuclear ribonucleoprotein Eview chain

1 domain

e3cw1E1(E:18-92)

Chain FSmall nuclear ribonucleoprotein Fview chain

1 domain

e3cw1F1(F:6-81)

Chain GSmall nuclear ribonucleoprotein Gview chain

1 domain

e3cw1G1(G:4-76)

Chain HSmall nuclear ribonucleoprotein-associated proteins B and B'view chain

1 domain

e3cw1H1(H:207-287)

Chain ISmall nuclear ribonucleoprotein-associated proteins B and B'view chain

1 domain

e3cw1I1(I:407-487)

Chain JSmall nuclear ribonucleoprotein-associated proteins B and B'view chain

1 domain

e3cw1J1(J:607-686)

Chain KU1 small nuclear ribonucleoprotein 70 kDaview chain

1 domain

e3cw1K1(K:103-180)

Chain lU1 small nuclear ribonucleoprotein Cview chain

1 domain

e3cw1l1(l:604-661)

Chain LU1 small nuclear ribonucleoprotein Cview chain

1 domain

e3cw1L1(L:4-60)

Chain MSmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e3cw1M1(M:202-278)

Chain NSmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e3cw1N1(N:402-477)

Chain OSmall nuclear ribonucleoprotein Sm D1view chain

1 domain

e3cw1O1(O:602-678)

Chain PSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e3cw1P1(P:211-312)

Chain QSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e3cw1Q1(Q:411-514)

Chain RSmall nuclear ribonucleoprotein Sm D2view chain

1 domain

e3cw1R1(R:611-713)

Chain SSmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e3cw1S1(S:206-281)

Chain TSmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e3cw1T1(T:406-481)

Chain USmall nuclear ribonucleoprotein Sm D3view chain

1 domain

e3cw1U1(U:606-681)

Chain WSmall nuclear ribonucleoprotein Eview chain

1 domain

e3cw1W1(W:218-292)

Chain XSmall nuclear ribonucleoprotein Eview chain

1 domain

e3cw1X1(X:418-492)

Chain YSmall nuclear ribonucleoprotein Eview chain

1 domain

e3cw1Y1(Y:618-692)

Chain ZSmall nuclear ribonucleoprotein Fview chain

1 domain

e3cw1Z1(Z:206-275)

All Domains (36)

#	Chain	Domain ID	Range	Family	Classification
1	0	e3cw101	0:404-457	zf-U1	386 → 386.1 → 386.1.1
2	1	e3cw111	1:407-481	LSM	4 → 4.1 → 4.1.1
3	2	e3cw121	2:606-681	LSM	4 → 4.1 → 4.1.1
4	3	e3cw131	3:204-276	LSM	4 → 4.1 → 4.1.1
5	4	e3cw141	4:404-476	LSM	4 → 4.1 → 4.1.1
6	5	e3cw151	5:604-676	LSM	4 → 4.1 → 4.1.1
7	6	e3cw161	6:303-380	RRM_1	304 → 304.9 → 304.9.1
8	7	e3cw171	7:503-580	RRM_1	304 → 304.9 → 304.9.1
9	8	e3cw181	8:703-780	RRM_1	304 → 304.9 → 304.9.1
10	9	e3cw191	9:204-261	zf-U1	386 → 386.1 → 386.1.1
11	A	e3cw1A1	A:7-87	LSM	4 → 4.1 → 4.1.1
12	B	e3cw1B1	B:2-78	LSM	4 → 4.1 → 4.1.1
13	C	e3cw1C1	C:11-114	LSM	4 → 4.1 → 4.1.1
14	D	e3cw1D1	D:6-81	LSM	4 → 4.1 → 4.1.1
15	E	e3cw1E1	E:18-92	LSM	4 → 4.1 → 4.1.1
16	F	e3cw1F1	F:6-81	LSM	4 → 4.1 → 4.1.1
17	G	e3cw1G1	G:4-76	LSM	4 → 4.1 → 4.1.1
18	H	e3cw1H1	H:207-287	LSM	4 → 4.1 → 4.1.1
19	I	e3cw1I1	I:407-487	LSM	4 → 4.1 → 4.1.1
20	J	e3cw1J1	J:607-686	LSM	4 → 4.1 → 4.1.1
21	K	e3cw1K1	K:103-180	RRM_1	304 → 304.9 → 304.9.1
22	l	e3cw1l1	l:604-661	zf-U1	386 → 386.1 → 386.1.1
23	L	e3cw1L1	L:4-60	zf-U1	386 → 386.1 → 386.1.1
24	M	e3cw1M1	M:202-278	LSM	4 → 4.1 → 4.1.1
25	N	e3cw1N1	N:402-477	LSM	4 → 4.1 → 4.1.1
26	O	e3cw1O1	O:602-678	LSM	4 → 4.1 → 4.1.1
27	P	e3cw1P1	P:211-312	LSM	4 → 4.1 → 4.1.1
28	Q	e3cw1Q1	Q:411-514	LSM	4 → 4.1 → 4.1.1
29	R	e3cw1R1	R:611-713	LSM	4 → 4.1 → 4.1.1
30	S	e3cw1S1	S:206-281	LSM	4 → 4.1 → 4.1.1
31	T	e3cw1T1	T:406-481	LSM	4 → 4.1 → 4.1.1
32	U	e3cw1U1	U:606-681	LSM	4 → 4.1 → 4.1.1
33	W	e3cw1W1	W:218-292	LSM	4 → 4.1 → 4.1.1
34	X	e3cw1X1	X:418-492	LSM	4 → 4.1 → 4.1.1
35	Y	e3cw1Y1	Y:618-692	LSM	4 → 4.1 → 4.1.1
36	Z	e3cw1Z1	Z:206-275	LSM	4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors