ECODEvolutionary Classification of Protein Domains

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PDB 3D5O

X-RAY DIFFRACTION2.80 Å6 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ASerum amyloid P-componentview chain

1 domain

e3d5oA1(A:1-204)

Chain BSerum amyloid P-componentview chain

1 domain

e3d5oB1(B:1-204)

Chain CSerum amyloid P-componentview chain

1 domain

e3d5oC1(C:1-204)

Chain DSerum amyloid P-componentview chain

1 domain

e3d5oD1(D:1-204)

Chain ESerum amyloid P-componentview chain

1 domain

e3d5oE1(E:1-204)

Chain FLow affinity immunoglobulin gamma Fc region receptor II-aview chain

2 domains

e3d5oF1(F:1-85)e3d5oF2(F:86-171)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3d5oA1	A:1-204	Pentaxin	10 → 10.1 → 10.1.1
2	B	e3d5oB1	B:1-204	Pentaxin	10 → 10.1 → 10.1.1
3	C	e3d5oC1	C:1-204	Pentaxin	10 → 10.1 → 10.1.1
4	D	e3d5oD1	D:1-204	Pentaxin	10 → 10.1 → 10.1.1
5	E	e3d5oE1	E:1-204	Pentaxin	10 → 10.1 → 10.1.1
6	F	e3d5oF1	F:1-85	Ig_2	11 → 11.1 → 11.1.1
7	F	e3d5oF2	F:86-171	Ig_2	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors