ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 3EPD

ELECTRON MICROSCOPY6 chains6 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain 1protein VP1view chain

1 domain

e3epd12(1:24-302)

Chain 2protein VP2view chain

1 domain

e3epd21(2:6-271)

Chain 3protein VP3view chain

1 domain

e3epd31(3:1-235)

Chain 4protein VP4view chain

1 domain

e3epd41(4:2-16,4:21-69)

Chain RPoliovirus receptorview chain

2 domains

e3epdR1(R:30-143)e3epdR2(R:143-242)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	1	e3epd12	1:24-302	Rhv	10 → 10.2 → 10.2.1
2	2	e3epd21	2:6-271	Rhv	10 → 10.2 → 10.2.1
3	3	e3epd31	3:1-235	Rhv	10 → 10.2 → 10.2.1
4	4	e3epd41	4:2-16,4:21-69	Pico_P1A	10 → 10.2 → 10.2.1
5	R	e3epdR1	R:30-143	V-set	11 → 11.1 → 11.1.1
6	R	e3epdR2	R:143-242	C2-set_2	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors