ECODEvolutionary Classification of Protein Domains

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PDB 3EPF

ELECTRON MICROSCOPY5 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Protein VP1view chain

1 domain

e3epf12(1:24-301)

Chain 2Protein VP2view chain

1 domain

e3epf21(2:10-271)

Chain 3Protein VP3view chain

1 domain

e3epf31(3:1-235)

Chain 4Protein VP4view chain

1 domain

e3epf41(4:2-69)

Chain RPoliovirus receptorview chain

2 domains

e3epfR1(R:30-143)e3epfR2(R:143-242)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	1	e3epf12	1:24-301	Rhv	10 → 10.2 → 10.2.1
2	2	e3epf21	2:10-271	Rhv	10 → 10.2 → 10.2.1
3	3	e3epf31	3:1-235	Rhv	10 → 10.2 → 10.2.1
4	4	e3epf41	4:2-69	Pico_P1A	10 → 10.2 → 10.2.1
5	R	e3epfR1	R:30-143	V-set	11 → 11.1 → 11.1.1
6	R	e3epfR2	R:143-242	C2-set_2	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors