ECODEvolutionary Classification of Protein Domains

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PDB 3F0D

X-RAY DIFFRACTION1.20 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain A2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseview chain

1 domain

e3f0dA1(A:1-159)

Chain B2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseview chain

1 domain

e3f0dB1(B:1-158)

Chain C2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseview chain

1 domain

e3f0dC1(C:1-158)

Chain D2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseview chain

1 domain

e3f0dD1(D:1-159)

Chain E2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseview chain

1 domain

e3f0dE1(E:1-158)

Chain F2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseview chain

1 domain

e3f0dF1(F:1-158)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3f0dA1	A:1-159	YgbB	301 → 301.5 → 301.5.1
2	B	e3f0dB1	B:1-158	YgbB	301 → 301.5 → 301.5.1
3	C	e3f0dC1	C:1-158	YgbB	301 → 301.5 → 301.5.1
4	D	e3f0dD1	D:1-159	YgbB	301 → 301.5 → 301.5.1
5	E	e3f0dE1	E:1-158	YgbB	301 → 301.5 → 301.5.1
6	F	e3f0dF1	F:1-158	YgbB	301 → 301.5 → 301.5.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors