ECODEvolutionary Classification of Protein Domains

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PDB 3HE6

X-RAY DIFFRACTION2.90 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e3he6A3(A:8-185)e3he6A4(A:186-279)

Chain BBeta-2-microglobulinview chain

1 domain

e3he6B1(B:1-99)

Chain CValpha14(mouse variable domain, human constant domain)view chain

2 domains

e3he6C1(C:1-117)e3he6C2(C:118-208)

Chain DVbeta8.2(mouse variable domain, human constant domain)view chain

2 domains

e3he6D3(D:122-247)e3he6D4(D:3-121)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3he6A3	A:8-185	MHC_I_3	233 → 233.1 → 233.1.1
2	A	e3he6A4	A:186-279	C1-set	11 → 11.1 → 11.1.1
3	B	e3he6B1	B:1-99	C1-set	11 → 11.1 → 11.1.1
4	C	e3he6C1	C:1-117	V-set	11 → 11.1 → 11.1.1
5	C	e3he6C2	C:118-208	DUF1968	11 → 11.1 → 11.1.1
6	D	e3he6D3	D:122-247	C1-set	11 → 11.1 → 11.1.1
7	D	e3he6D4	D:3-121	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors