ECODEvolutionary Classification of Protein Domains

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PDB 3J1O

ELECTRON MICROSCOPY7 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain HMediator of RNA polymerase II transcription subunit 11view chain

1 domain

e3j1oH1(H:21-129)

Chain IMediator of RNA polymerase II transcription subunit 17view chain

1 domain

e3j1oI1(I:197-245,I:265-315,I:423-575,I:600-686)

Chain JMediator of RNA polymerase II transcription subunit 8view chain

1 domain

e3j1oJ2(J:29-171,J:195-210)

Chain KMediator of RNA polymerase II transcription subunit 22view chain

1 domain

e3j1oK1(K:4-120)

Chain LMediator of RNA polymerase II transcription subunit 18view chain

1 domain

e3j1oL1(L:2-107,L:159-300)

Chain MMediator of RNA polymerase II transcription subunit 20view chain

1 domain

e3j1oM1(M:2-210)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	H	e3j1oH1	H:21-129	Med11	3712 → 3712.1 → 3712.1.1
2	I	e3j1oI1	I:197-245,I:265-315,I:423-575,I:600-686	Med17	3561 → 3561.1 → 3561.1.1
3	J	e3j1oJ2	J:29-171,J:195-210	Med8	3560 → 3560.1 → 3560.1.1
4	K	e3j1oK1	K:4-120	Med22	3559 → 3559.1 → 3559.1.1
5	L	e3j1oL1	L:2-107,L:159-300	Med18	868 → 868.1 → 868.1.1
6	M	e3j1oM1	M:2-210	Med20	868 → 868.1 → 868.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors