ECODEvolutionary Classification of Protein Domains

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PDB 3JBA

ELECTRON MICROSCOPY8 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMajor capsid protein L1view chain

1 domain

e3jbaA1(A:9-486)

Chain BMajor capsid protein L1view chain

1 domain

e3jbaB1(B:9-486)

Chain CMajor capsid protein L1view chain

1 domain

e3jbaC1(C:9-486)

Chain DMajor capsid protein L1view chain

1 domain

e3jbaD1(D:9-486)

Chain EMajor capsid protein L1view chain

1 domain

e3jbaE1(E:9-486)

Chain FMajor capsid protein L1view chain

1 domain

e3jbaF1(F:9-486)

Chain HH16.U4 antibody heavy chainview chain

1 domain

e3jbaH1(H:7-112)

Chain LH16.U4 antibody light chainview chain

1 domain

e3jbaL1(L:1-109)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3jbaA1	A:9-486	Late_protein_L1	10 → 10.2 → 10.2.1
2	B	e3jbaB1	B:9-486	Late_protein_L1	10 → 10.2 → 10.2.1
3	C	e3jbaC1	C:9-486	Late_protein_L1	10 → 10.2 → 10.2.1
4	D	e3jbaD1	D:9-486	Late_protein_L1	10 → 10.2 → 10.2.1
5	E	e3jbaE1	E:9-486	Late_protein_L1	10 → 10.2 → 10.2.1
6	F	e3jbaF1	F:9-486	Late_protein_L1	10 → 10.2 → 10.2.1
7	H	e3jbaH1	H:7-112	V-set	11 → 11.1 → 11.1.1
8	L	e3jbaL1	L:1-109	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors