ECODEvolutionary Classification of Protein Domains

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PDB 3JUY

X-RAY DIFFRACTION2.50 Å6 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain A3B3 single chain variant HIV-1 antibodyview chain

2 domains

e3juyA1(A:143-249)e3juyA2(A:1-126)

Chain B3B3 single chain variant HIV-1 antibodyview chain

2 domains

e3juyB1(B:132-250)e3juyB2(B:1-131)

Chain C3B3 single chain variant HIV-1 antibodyview chain

2 domains

e3juyC1(C:142-250)e3juyC2(C:1-127)

Chain D3B3 single chain variant HIV-1 antibodyview chain

2 domains

e3juyD1(D:143-249)e3juyD2(D:1-127)

Chain E3B3 single chain variant HIV-1 antibodyview chain

2 domains

e3juyE1(E:143-249)e3juyE2(E:1-127)

Chain F3B3 single chain variant HIV-1 antibodyview chain

2 domains

e3juyF1(F:143-249)e3juyF2(F:1-127)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3juyA1	A:143-249	V-set	11 → 11.1 → 11.1.1
2	A	e3juyA2	A:1-126	V-set	11 → 11.1 → 11.1.1
3	B	e3juyB1	B:132-250	V-set	11 → 11.1 → 11.1.1
4	B	e3juyB2	B:1-131	V-set	11 → 11.1 → 11.1.1
5	C	e3juyC1	C:142-250	V-set	11 → 11.1 → 11.1.1
6	C	e3juyC2	C:1-127	V-set	11 → 11.1 → 11.1.1
7	D	e3juyD1	D:143-249	V-set	11 → 11.1 → 11.1.1
8	D	e3juyD2	D:1-127	V-set	11 → 11.1 → 11.1.1
9	E	e3juyE1	E:143-249	V-set	11 → 11.1 → 11.1.1
10	E	e3juyE2	E:1-127	V-set	11 → 11.1 → 11.1.1
11	F	e3juyF1	F:143-249	V-set	11 → 11.1 → 11.1.1
12	F	e3juyF2	F:1-127	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors