ECODEvolutionary Classification of Protein Domains

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PDB 3MFE

X-RAY DIFFRACTION2.60 Å28 chains28 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Proteasome subunit alphaview chain

1 domain

e3mfe11(1:10-234)

Chain 2Proteasome subunit betaview chain

1 domain

e3mfe21(2:301-522)

Chain AProteasome subunit alphaview chain

1 domain

e3mfeA1(A:9-234)

Chain BProteasome subunit alphaview chain

1 domain

e3mfeB1(B:9-235)

Chain CProteasome subunit betaview chain

1 domain

e3mfeC1(C:301-522)

Chain DProteasome subunit alphaview chain

1 domain

e3mfeD1(D:10-234)

Chain EProteasome subunit betaview chain

1 domain

e3mfeE1(E:301-522)

Chain FProteasome subunit alphaview chain

1 domain

e3mfeF1(F:11-234)

Chain GProteasome subunit betaview chain

1 domain

e3mfeG1(G:301-522)

Chain HProteasome subunit betaview chain

1 domain

e3mfeH1(H:301-522)

Chain IProteasome subunit alphaview chain

1 domain

e3mfeI1(I:9-235)

Chain JProteasome subunit betaview chain

1 domain

e3mfeJ1(J:301-522)

Chain KProteasome subunit alphaview chain

1 domain

e3mfeK1(K:10-235)

Chain LProteasome subunit betaview chain

1 domain

e3mfeL1(L:301-522)

Chain MProteasome subunit alphaview chain

1 domain

e3mfeM3(M:27-232)

Chain NProteasome subunit betaview chain

1 domain

e3mfeN1(N:301-522)

Chain OProteasome subunit alphaview chain

1 domain

e3mfeO1(O:10-235)

Chain PProteasome subunit betaview chain

1 domain

e3mfeP1(P:301-522)

Chain QProteasome subunit alphaview chain

1 domain

e3mfeQ1(Q:10-234)

Chain RProteasome subunit betaview chain

1 domain

e3mfeR1(R:301-522)

Chain SProteasome subunit alphaview chain

1 domain

e3mfeS1(S:9-235)

Chain TProteasome subunit betaview chain

1 domain

e3mfeT1(T:301-522)

Chain UProteasome subunit alphaview chain

1 domain

e3mfeU1(U:10-234)

Chain VProteasome subunit betaview chain

1 domain

e3mfeV1(V:301-524)

Chain WProteasome subunit alphaview chain

1 domain

e3mfeW1(W:14-234)

Chain XProteasome subunit betaview chain

1 domain

e3mfeX1(X:301-522)

Chain YProteasome subunit alphaview chain

1 domain

e3mfeY1(Y:10-234)

Chain ZProteasome subunit betaview chain

1 domain

e3mfeZ1(Z:301-522)

All Domains (28)

#	Chain	Domain ID	Range	Family	Classification
1	1	e3mfe11	1:10-234	Proteasome	210 → 210.1 → 210.1.1
2	2	e3mfe21	2:301-522	Proteasome	210 → 210.1 → 210.1.1
3	A	e3mfeA1	A:9-234	Proteasome	210 → 210.1 → 210.1.1
4	B	e3mfeB1	B:9-235	Proteasome	210 → 210.1 → 210.1.1
5	C	e3mfeC1	C:301-522	Proteasome	210 → 210.1 → 210.1.1
6	D	e3mfeD1	D:10-234	Proteasome	210 → 210.1 → 210.1.1
7	E	e3mfeE1	E:301-522	Proteasome	210 → 210.1 → 210.1.1
8	F	e3mfeF1	F:11-234	Proteasome	210 → 210.1 → 210.1.1
9	G	e3mfeG1	G:301-522	Proteasome	210 → 210.1 → 210.1.1
10	H	e3mfeH1	H:301-522	Proteasome	210 → 210.1 → 210.1.1
11	I	e3mfeI1	I:9-235	Proteasome	210 → 210.1 → 210.1.1
12	J	e3mfeJ1	J:301-522	Proteasome	210 → 210.1 → 210.1.1
13	K	e3mfeK1	K:10-235	Proteasome	210 → 210.1 → 210.1.1
14	L	e3mfeL1	L:301-522	Proteasome	210 → 210.1 → 210.1.1
15	M	e3mfeM3	M:27-232	Proteasome	210 → 210.1 → 210.1.1
16	N	e3mfeN1	N:301-522	Proteasome	210 → 210.1 → 210.1.1
17	O	e3mfeO1	O:10-235	Proteasome	210 → 210.1 → 210.1.1
18	P	e3mfeP1	P:301-522	Proteasome	210 → 210.1 → 210.1.1
19	Q	e3mfeQ1	Q:10-234	Proteasome	210 → 210.1 → 210.1.1
20	R	e3mfeR1	R:301-522	Proteasome	210 → 210.1 → 210.1.1
21	S	e3mfeS1	S:9-235	Proteasome	210 → 210.1 → 210.1.1
22	T	e3mfeT1	T:301-522	Proteasome	210 → 210.1 → 210.1.1
23	U	e3mfeU1	U:10-234	Proteasome	210 → 210.1 → 210.1.1
24	V	e3mfeV1	V:301-524	Proteasome	210 → 210.1 → 210.1.1
25	W	e3mfeW1	W:14-234	Proteasome	210 → 210.1 → 210.1.1
26	X	e3mfeX1	X:301-522	Proteasome	210 → 210.1 → 210.1.1
27	Y	e3mfeY1	Y:10-234	Proteasome	210 → 210.1 → 210.1.1
28	Z	e3mfeZ1	Z:301-522	Proteasome	210 → 210.1 → 210.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors