ECODEvolutionary Classification of Protein Domains

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PDB 3MKA

X-RAY DIFFRACTION2.50 Å28 chains28 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 1Proteasome subunit alphaview chain

1 domain

e3mka11(1:5-235)

Chain 2Proteasome subunit betaview chain

1 domain

e3mka21(2:-38-522)

Chain AProteasome subunit alphaview chain

1 domain

e3mkaA1(A:4-235)

Chain BProteasome subunit alphaview chain

1 domain

e3mkaB1(B:5-235)

Chain CProteasome subunit betaview chain

1 domain

e3mkaC1(C:-39-522)

Chain DProteasome subunit alphaview chain

1 domain

e3mkaD1(D:3-234)

Chain EProteasome subunit betaview chain

1 domain

e3mkaE1(E:-39-523)

Chain FProteasome subunit alphaview chain

1 domain

e3mkaF1(F:5-235)

Chain GProteasome subunit betaview chain

1 domain

e3mkaG1(G:-39-522)

Chain HProteasome subunit betaview chain

1 domain

e3mkaH1(H:-39-522)

Chain IProteasome subunit alphaview chain

1 domain

e3mkaI1(I:5-234)

Chain JProteasome subunit betaview chain

1 domain

e3mkaJ1(J:-39-522)

Chain KProteasome subunit alphaview chain

1 domain

e3mkaK1(K:4-235)

Chain LProteasome subunit betaview chain

1 domain

e3mkaL1(L:-38-524)

Chain MProteasome subunit alphaview chain

1 domain

e3mkaM1(M:2-235)

Chain NProteasome subunit betaview chain

1 domain

e3mkaN1(N:-39-523)

Chain OProteasome subunit alphaview chain

1 domain

e3mkaO1(O:7-235)

Chain PProteasome subunit betaview chain

1 domain

e3mkaP1(P:-39-522)

Chain QProteasome subunit alphaview chain

1 domain

e3mkaQ1(Q:3-235)

Chain RProteasome subunit betaview chain

1 domain

e3mkaR1(R:-39-522)

Chain SProteasome subunit alphaview chain

1 domain

e3mkaS1(S:6-235)

Chain TProteasome subunit betaview chain

1 domain

e3mkaT1(T:-38-522)

Chain UProteasome subunit alphaview chain

1 domain

e3mkaU1(U:5-235)

Chain VProteasome subunit betaview chain

1 domain

e3mkaV1(V:-39-523)

Chain WProteasome subunit alphaview chain

1 domain

e3mkaW1(W:3-235)

Chain XProteasome subunit betaview chain

1 domain

e3mkaX1(X:-38-522)

Chain YProteasome subunit alphaview chain

1 domain

e3mkaY1(Y:2-235)

Chain ZProteasome subunit betaview chain

1 domain

e3mkaZ1(Z:-38-522)

All Domains (28)

#	Chain	Domain ID	Range	Family	Classification
1	1	e3mka11	1:5-235	Proteasome	210 → 210.1 → 210.1.1
2	2	e3mka21	2:-38-522	Proteasome	210 → 210.1 → 210.1.1
3	A	e3mkaA1	A:4-235	Proteasome	210 → 210.1 → 210.1.1
4	B	e3mkaB1	B:5-235	Proteasome	210 → 210.1 → 210.1.1
5	C	e3mkaC1	C:-39-522	Proteasome	210 → 210.1 → 210.1.1
6	D	e3mkaD1	D:3-234	Proteasome	210 → 210.1 → 210.1.1
7	E	e3mkaE1	E:-39-523	Proteasome	210 → 210.1 → 210.1.1
8	F	e3mkaF1	F:5-235	Proteasome	210 → 210.1 → 210.1.1
9	G	e3mkaG1	G:-39-522	Proteasome	210 → 210.1 → 210.1.1
10	H	e3mkaH1	H:-39-522	Proteasome	210 → 210.1 → 210.1.1
11	I	e3mkaI1	I:5-234	Proteasome	210 → 210.1 → 210.1.1
12	J	e3mkaJ1	J:-39-522	Proteasome	210 → 210.1 → 210.1.1
13	K	e3mkaK1	K:4-235	Proteasome	210 → 210.1 → 210.1.1
14	L	e3mkaL1	L:-38-524	Proteasome	210 → 210.1 → 210.1.1
15	M	e3mkaM1	M:2-235	Proteasome	210 → 210.1 → 210.1.1
16	N	e3mkaN1	N:-39-523	Proteasome	210 → 210.1 → 210.1.1
17	O	e3mkaO1	O:7-235	Proteasome	210 → 210.1 → 210.1.1
18	P	e3mkaP1	P:-39-522	Proteasome	210 → 210.1 → 210.1.1
19	Q	e3mkaQ1	Q:3-235	Proteasome	210 → 210.1 → 210.1.1
20	R	e3mkaR1	R:-39-522	Proteasome	210 → 210.1 → 210.1.1
21	S	e3mkaS1	S:6-235	Proteasome	210 → 210.1 → 210.1.1
22	T	e3mkaT1	T:-38-522	Proteasome	210 → 210.1 → 210.1.1
23	U	e3mkaU1	U:5-235	Proteasome	210 → 210.1 → 210.1.1
24	V	e3mkaV1	V:-39-523	Proteasome	210 → 210.1 → 210.1.1
25	W	e3mkaW1	W:3-235	Proteasome	210 → 210.1 → 210.1.1
26	X	e3mkaX1	X:-38-522	Proteasome	210 → 210.1 → 210.1.1
27	Y	e3mkaY1	Y:2-235	Proteasome	210 → 210.1 → 210.1.1
28	Z	e3mkaZ1	Z:-38-522	Proteasome	210 → 210.1 → 210.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors