ECODEvolutionary Classification of Protein Domains

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PDB 3NFF

X-RAY DIFFRACTION3.24 Å8 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ARNA polymerase I subunit A49view chain

1 domain

e3nffA1(A:6-104)

Chain BRNA polymerase I subunit A34.5view chain

1 domain

e3nffB1(B:25-139)

Chain CRNA polymerase I subunit A49view chain

1 domain

e3nffC1(C:-2-90)

Chain DRNA polymerase I subunit A34.5view chain

1 domain

e3nffD2(D:25-139)

Chain ERNA polymerase I subunit A49view chain

1 domain

e3nffE1(E:-2-90)

Chain FRNA polymerase I subunit A34.5view chain

1 domain

e3nffF2(F:25-139)

Chain GRNA polymerase I subunit A49view chain

1 domain

e3nffG1(G:-2-90)

Chain HRNA polymerase I subunit A34.5view chain

1 domain

e3nffH2(H:25-140)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3nffA1	A:6-104	RNA_pol_I_A49	59 → 59.1 → 59.1.3
2	B	e3nffB1	B:25-139	RNA_polI_A34	59 → 59.1 → 59.1.3
3	C	e3nffC1	C:-2-90	RNA_pol_I_A49	59 → 59.1 → 59.1.3
4	D	e3nffD2	D:25-139	RNA_polI_A34	59 → 59.1 → 59.1.3
5	E	e3nffE1	E:-2-90	RNA_pol_I_A49	59 → 59.1 → 59.1.3
6	F	e3nffF2	F:25-139	RNA_polI_A34	59 → 59.1 → 59.1.3
7	G	e3nffG1	G:-2-90	RNA_pol_I_A49	59 → 59.1 → 59.1.3
8	H	e3nffH2	H:25-140	RNA_polI_A34	59 → 59.1 → 59.1.3

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors