ECODEvolutionary Classification of Protein Domains

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PDB 3P9W

X-RAY DIFFRACTION2.41 Å8 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AVascular endothelial growth factor Aview chain

1 domain

e3p9wA1(A:8-107)

Chain Bhuman VEGFview chain

1 domain

e3p9wB1(B:1-113)

Chain CVascular endothelial growth factor Aview chain

1 domain

e3p9wC2(C:12-108)

Chain Dhuman VEGFview chain

1 domain

e3p9wD1(D:1-113)

Chain EVascular endothelial growth factor Aview chain

1 domain

e3p9wE2(E:12-108)

Chain Fhuman VEGFview chain

1 domain

e3p9wF1(F:1-113)

Chain GVascular endothelial growth factor Aview chain

1 domain

e3p9wG2(G:11-107)

Chain Hhuman VEGFview chain

1 domain

e3p9wH1(H:1-113)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3p9wA1	A:8-107	PDGF	385 → 385.1 → 385.1.1
2	B	e3p9wB1	B:1-113	V-set	11 → 11.1 → 11.1.1
3	C	e3p9wC2	C:12-108	PDGF	385 → 385.1 → 385.1.1
4	D	e3p9wD1	D:1-113	V-set	11 → 11.1 → 11.1.1
5	E	e3p9wE2	E:12-108	PDGF	385 → 385.1 → 385.1.1
6	F	e3p9wF1	F:1-113	V-set	11 → 11.1 → 11.1.1
7	G	e3p9wG2	G:11-107	PDGF	385 → 385.1 → 385.1.1
8	H	e3p9wH1	H:1-113	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors