ECODEvolutionary Classification of Protein Domains

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PDB 3PBP

X-RAY DIFFRACTION2.60 Å12 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ANucleoporin NUP82view chain

1 domain

e3pbpA1(A:7-452)

Chain BNucleoporin NUP116/NSP116view chain

1 domain

e3pbpB1(B:966-1111)

Chain DNucleoporin NUP82view chain

1 domain

e3pbpD1(D:7-452)

Chain ENucleoporin NUP116/NSP116view chain

1 domain

e3pbpE1(E:966-1111)

Chain GNucleoporin NUP82view chain

1 domain

e3pbpG1(G:7-452)

Chain HNucleoporin NUP116/NSP116view chain

1 domain

e3pbpH1(H:966-1111)

Chain JNucleoporin NUP82view chain

1 domain

e3pbpJ1(J:6-452)

Chain KNucleoporin NUP116/NSP116view chain

1 domain

e3pbpK1(K:966-1111)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e3pbpA1	A:7-452	5.1.4.0	5 → 5.1 → 5.1.4
2	B	e3pbpB1	B:966-1111	Nucleoporin2	12 → 12.5 → 12.5.1
3	D	e3pbpD1	D:7-452	5.1.4.0	5 → 5.1 → 5.1.4
4	E	e3pbpE1	E:966-1111	Nucleoporin2	12 → 12.5 → 12.5.1
5	G	e3pbpG1	G:7-452	5.1.4.0	5 → 5.1 → 5.1.4
6	H	e3pbpH1	H:966-1111	Nucleoporin2	12 → 12.5 → 12.5.1
7	J	e3pbpJ1	J:6-452	5.1.4.0	5 → 5.1 → 5.1.4
8	K	e3pbpK1	K:966-1111	Nucleoporin2	12 → 12.5 → 12.5.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors